Pseudomonas sp. TCU-HL1: THL1_1529
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Entry
THL1_1529 CDS
T05373
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_1529
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
Other families
THL1_1529
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
RWP-RK
HTH_31
ARM_KNTC1_3rd
DUF8299
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AOE84077
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Position
complement(1642653..1643522)
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AA seq
289 aa
AA seq
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MDRVHNLLEQIQNRLDELNKAERKVAEVILRDPQQATRYSIAALAQAAQVSEPTVNRFCR
SFGVNGYPELKMQLAQSLASGAAYVSQAVAADDGPEAYTRKIFGSAIASLDSALQTLDPQ
LVSRAVDLMIQARQIHFFGLGASASVALDAQHKFFRFNLAVSAHSDVLMQRMLASVAHTG
DLFVIISYTGRTRELVEVARLARQNGASVLGLTAAGSPLAKASTLSLDIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPTDEEPS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcacaacctgctggagcagatccagaaccgcctcgacgaactcaacaag
gctgagcgcaaggtcgccgaagtcatcctgcgcgacccgcaacaagccacccgctacagc
attgccgcgctggcccaggccgcgcaggtcagcgagccgacggtgaaccgcttctgccgc
tccttcggcgtcaacggctaccccgaactgaagatgcaactggcgcagagcctggccagc
ggtgccgcctacgtcagccaggcggtcgcggcggacgacggccccgaggcctacacgcgg
aagatcttcggcagcgccatcgcctccctggacagcgccctgcagaccctcgacccacaa
ctggtcagccgcgccgtggacctgatgatccaggcccggcaaatccacttcttcggcctt
ggcgcctcggcctcggtggccctggacgcccagcacaagttcttccgtttcaacctcgcc
gtgtccgcccattccgatgtactgatgcagcgcatgctcgcgtcggtggcgcacacgggc
gacctgttcgtgatcatttcctacaccggccgcacccgcgagctggtggaggtagcgcgc
ctggcacggcagaacggcgcctcggtactcggcctgacggccgccggctcgcccttggcc
aaggccagcaccctgagcctggatatcccgctgccggaagacaccgacatctacatgccg
atgacctcgcgcatcatccagctcaccgtgctcgacgtgctcgccaccggcatgaccctg
cgccgcggcgtcgacttccagccgcacctgcgcaagatcaaggaaagcctcaacgccagc
cggtatccgacggatgaagagccatcctga
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