Pseudomonas sp. TCU-HL1: THL1_1781
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Entry
THL1_1781 CDS
T05373
Name
(GenBank) ycaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pset03009
]
THL1_1781
Ribosome biogenesis [BR:
pset03009
]
Prokaryotic type
ribosomal protein modification factors
THL1_1781
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AOE84329
UniProt:
A0A1B3E456
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Position
1899611..1900780
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AA seq
389 aa
AA seq
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MEIQNYERTQLDVSRKELLKQAIDGLGLRCVVDKVDAYVAISALYDPAGNLVSEGAGKGF
GCDIGATAEAIEHYCLQMEGRSETCLYPNEFISLQESVLKDGVIRNISNFDGLLECVEFK
AVYGDGKVIIPKILVSPEDDIQTSPDCLFLERYSTNSGSAFGCTFEEAILHGVNEVLERH
VLSLVMLDIVDESSLVKVNKLSSEFLDSVFLPFDLALSGEARVYYVSDVFGGFFCLAVRD
CQEEDFLLPQIGSGCSQSFTLALTRAVFELRQAEALYGYEERLVDEQAARIMSKSKRLEG
LRSLYPRCTCSSDEMPSLIDVNSQQPVRQLEEIIRRLNANGYEVYYRVVRKINSSSIVTQ
VYIPGMERLNLIRSGKWVAPQKALLKPFF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcagaattatgaaaggactcagcttgatgtttctagaaaggagttgctcaaa
caggctattgatggtcttggtctcaggtgtgtagttgataaggtggatgcatatgttgct
atttcagctctttatgatccggcaggaaatctggtatcggaaggcgctggaaaaggtttt
ggttgcgatataggggcaacggctgaagcaattgaacactactgcttgcaaatggaggga
agaagtgagacttgtctttacccaaatgaattcatttctttgcaagagtctgttcttaag
gacggggttattcgtaatatttcgaactttgatggtctcttggaatgtgtggagttcaag
gcggtttacggggatggaaaggtaatcattccaaaaatccttgtttctcccgaggacgat
atccagacgtcacctgattgcttgtttttggagcgctactcgacaaattcgggttctgca
tttggatgcacgtttgaagaagcgattttgcatggggtaaatgaagtacttgaacgtcat
gttttgtcattggtgatgcttgatatcgttgatgagtcttcacttgttaaggttaataaa
ctctcgtctgagttcctggatagtgttttccttcccttcgatctggcgttgagtggggaa
gctagagtctattatgtgtctgatgtttttgggggcttcttttgcttggcggttagggac
tgtcaagaagaagattttttattaccacagataggttcggggtgctcgcagtcatttaca
ttggctctgaccagagctgtattcgaactgaggcaggctgaggcgctttatggatatgag
gaacgtcttgtagatgagcaggctgctaggattatgtcgaaatctaaacgactagagggg
ctgcgatctctctatccgcggtgtacttgtagttcggatgagatgccctcgttgatcgac
gttaacagccagcaaccagttcgccaactagaagaaattattcggaggctaaatgcgaat
ggctatgaggtgtactacagggtcgtgcggaaaataaattcctcttcaattgtgacgcaa
gtctatattccggggatggaaagattgaatttgattagaagcgggaaatgggtagcccca
caaaaggcgcttctgaaaccatttttctga
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