Entry |
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Name |
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KO |
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Organism |
pset Pseudomonas sp. TCU-HL1
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Brite |
KEGG Orthology (KO) [BR:pset00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:pset03016]
THL1_1838
Enzymes [BR:pset01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
THL1_1838
Transfer RNA biogenesis [BR:pset03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
THL1_1838
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1957227..1958354
|
AA seq |
375 aa
MAIDIIWIRDDASLAKHCADWRRLPFVTLDTEFMRVDTFYPKAGLVQVGDGERAFLIDPL
LIGDWSAFAGLLEDTAVLKVVHACSEDLEVFLRLTGSLPQPLLDTQLAAGYLGIGYSMGY
SRLVQSVLGIDLPKDETRSDWLQRPLTEMQVRYAAEDVQHLAEVYAALAPRLTEPKRAWV
LEDCAELVANLRREIAPEELYREAKLAWKLSRAQLAVLRELCAWREIEARLRDQPRNRIL
REHSLWPLARFQPDNLVSLARIDDMHPRTVRQDGNTLLKLIREAAETPPEHWPETLPEPL
PHEASPLLKKLRAVGQAEAERLGMAPELMLRKKHLEALLKSGYPDGPYSLPEGLRGWRRE
LMGQALLDTLATAGQ |
NT seq |
1128 nt +upstreamnt +downstreamnt
gtggccatcgacattatctggattcgcgacgacgcctcgctggccaaacactgcgccgat
tggcgtcgcctgcccttcgtgaccctggacaccgagttcatgcgggtcgacaccttctat
cccaaggccgggctggtgcaggtcggcgacggcgagcgggctttcctgatcgatccgctg
ctgattggcgactggtccgccttcgccgggctgctggaagacaccgccgtgctcaaggtg
gtgcatgcctgcagcgaagacctggaagtcttcctgcgcctgaccggctcgttgccgcaa
ccgctactggatacccaactggctgccggctacctgggcatcggttactccatggggtac
tcgcgcctggtgcagtcggtgctgggcatcgacctgccgaaggacgaaacccgctccgac
tggctgcagcgcccgctcaccgagatgcaggtgcgctatgccgccgaagacgtccagcac
ctggccgaggtctacgccgccctggcaccgcgcctgaccgagcccaagcgcgcctgggta
ctggaagactgtgccgagctggtggccaacctgcgccgcgagattgcccccgaagagctc
taccgcgaagccaagctggcctggaaactgtcacgcgcccagctcgcggtactgcgagag
ctgtgtgcctggcgcgaaatagaggcacgcctgcgtgaccagccgcgcaaccgcattctc
cgcgagcacagcctctggcccctggcgcgcttccagccggacaatttggtatcgctggcg
agaatcgacgacatgcatccgcgcaccgtgcgtcaggacggcaataccctgcttaaattg
atccgcgaggccgccgagacgccgcccgagcactggcccgagacgctgcccgagccgttg
ccgcacgaggcctcgccgctgctgaagaagctgcgcgcggttggccaggccgaagccgag
cgcctgggaatggccccggaactgatgctgcgcaagaagcacctggaggccctgctgaag
agcggctaccccgatggcccctacagcctgcccgagggcctgcgtggctggcgccgcgag
ttgatgggccaggccctgctggacaccctggccactgccggccaatga |