Pseudomonas sp. TCU-HL1: THL1_19
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Entry
THL1_19 CDS
T05373
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pset03009
]
THL1_19
Enzymes [BR:
pset01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
THL1_19
Ribosome biogenesis [BR:
pset03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
THL1_19
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
MTS
PCMT
Methyltransf_24
Methyltransf_31
Methyltransf_37
CMAS
Motif
Other DBs
NCBI-ProteinID:
AOE82568
LinkDB
All DBs
Position
complement(18690..20003)
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AA seq
437 aa
AA seq
DB search
MNPRLAAARALATVLSGKASLGGSLPPQLDKVDPRDRALAQDLAFGAARWQPRLSALAER
LLQKPFKAADKDVEALLLVGLYQLFYTRIPAHAAIGETVGCSDKLKKPWAKGLLNAVLRN
AQRQGETIFAELERDPAARTAHPRWLQKALKAAWPEHWEAVCAANNAHPPLILRVNRRHG
SREAYLAELQQAGIAAEPCTFSHDGIRLVEACDVKTLPGFAEGRVSVQDEAAQLAADLLE
LAPGQRLLDACCAPGGKTCHVLEAEPGLSEVVAVDLEESRLVRVRENLARLGLQAHLIAA
DGRDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQAEDIAALAQLQGELLDTLWP
TLEVGGVLLYATCSTLPQENSDNIAAFLARTPGARELDIPGPFGLKQPHGRQLLAQENGH
DGFYYAKLIKIAASPRG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgtctcgccgccgcccgcgccctggccacagtactttccggcaaggcttcc
ctgggcggcagcctgccgccccagctggacaaggtcgaccctcgcgatcgcgccctggcc
caggacctggccttcggcgccgcccgctggcaaccgcgcctcagcgccttggccgaacgc
ctgctgcagaagccgttcaaggccgccgacaaggatgtggaagccctgctgctggtcggc
ctctaccagctcttctacacccgcattcccgcccatgccgccattggcgaaaccgttggc
tgctcggacaaactgaagaaaccctgggccaagggactgctcaatgccgtgctgcgcaat
gctcagcgccagggtgaaacgatcttcgccgaactcgagcgcgacccggccgcccgcacc
gcccacccacgctggctgcagaaggcgctgaaagccgcctggccggaacactgggaagca
gtctgcgcggcgaacaatgctcacccgccgttgatcctgcgggtcaatcgccgacatggc
agccgcgaagcttatctggccgaactgcagcaggccggcatcgccgccgagccctgcacc
ttcagccacgatggcatccgccttgtcgaagcctgcgacgtgaagaccctgccgggcttc
gccgagggccgcgtcagcgtgcaggacgaagccgcacaactggccgccgacctgctggag
ctggcccctggccaacggctgctggatgcctgctgcgcccctggcggcaagacctgccat
gtactggaggccgagccgggcctgtctgaagtggtggctgtcgatctggaagaaagccgc
ctggtgcgcgtacgcgagaacctcgcgcgacttggcctgcaggcacacctgatcgccgcc
gacggccgggataccgccagttggtgggacggcaaaccgttccagcgcatcctcctcgac
gccccctgttcggccaccggcgtgatccgccgccacccggacatcaagctgacccgccag
gcggaagacattgccgcactggcccagctccagggcgaactgctggacaccctctggcca
accctggaggtaggcggcgtgctgctctacgccacatgctccaccctgccacaggaaaac
agcgacaacatcgccgccttccttgcccgcaccccaggtgcccgcgagctggacatcccc
ggccccttcggactgaaacaaccccacggccgtcaactgctggcgcaggaaaacggccat
gacggtttctactatgccaagctgatcaagattgccgcctcgcctcgaggctaa
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