Pseudomonas sp. TCU-HL1: THL1_1921
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Entry
THL1_1921 CDS
T05373
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pset03036
]
THL1_1921
Chromosome and associated proteins [BR:
pset03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
THL1_1921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
DUF4763
ABC_tran
BORCS7
DUF1664
Motif
Other DBs
NCBI-ProteinID:
AOE84469
UniProt:
A0A1B3E4J8
LinkDB
All DBs
Position
2057420..2060908
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKCIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSNTRKPVAQASIELIFDNSDNSLVGEYAAFAEISIRRRVSRDGQNTYFLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIEEAAGISKYKERRRET
ESRIRRTQENLARLTDLREELERQLERLHRQAQSAEKYQEFKAEERQLKAQLAALKWRAL
NDQVGQREAVIGNQEVSFEALVAEQRNADASIERLRDGHHELSERFNQVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAERARQETESHLGHDRTLLATLGEELDMLGPEQEMSA
AAAEEAAAQLEEAETGMHAWQEQWDGFNQRSAEPRRQAEVQQARIQQLDHSLERLVERER
RLNDESAQLAADPEDAAVLELSEALAVGELRLEELQASEQGLAERLDSVRDELQQAAAVQ
QQAQGELQRLNGRIASLEALQQAALDPGKGAAQWLREQQLAERPRLAEGLRVEQGWELAV
ETVLGADLQAVLLDDFNGLDLSAFNQGELRLASAGKGGARVPGSLLDKVEAPMDLAPWLA
KVQPVESLEQALARHANLAEGESLISRDGYWVGRNFLRVRRASEAESGLLARGQELERLH
AEREEREAALEQLDERLQHLRDSQRQQEEAREQQRRQLQEEARSLGELKARLSAQQAKVE
QLTLRRKRLDEERGELEEQRSLEHEQLGEARLTLQDALDAMATDTELREKLLAERDSLRE
CLDRIRQEARQHKDHAHQLAVRVGALRAQHDSTRQALERLALQFERLNERREQLSLNLEE
GAAPLEELRLKLEELLEKRLGVEEELKLARLALEDADRELRDAEKRRTQAEQQAQLLRGQ
LEQQRLEWQALTVRRKTLQEQLYEDGYDLHGVLATLPGEASEGAWEEELERLAARIQRLG
PINLAAIDEYQQQSERKRYLDAQNDDLVEALDTLENVIRKIDKETRNRFKETFDQINAGL
QALFPKVFGGGHAYLELTGEDLLDTGVAIMARPPGKKNSTIHLLSGGEKALTALALVFAI
FQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSEKVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEAMSMVEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgaagtgcatcaagctggccgggttcaaatccttcgttgacccgaccactgtc
agctttcccagcaacatggcggccgtagtcggccccaatggctgcggaaagtcgaacatt
atcgacgccgttcgctgggtaatgggtgaaagttcggcaaagaaccttcgcggcgagtcg
atgaccgatgtcatcttcaacggctccaacacccgcaagccggtcgcccaggccagcatc
gaactcatcttcgataactcggacaactccttggtcggcgagtacgccgccttcgccgag
atttccatccgccgccgcgtcagccgcgacggccagaacacctatttcctcaacggcacc
aagtgccgtcgtcgcgacattaccgacatcttcctcggcaccggcctggggccacgcagt
tattcgatcatcgagcaggggatgatctctaagctgatcgaggccaaaccggaggatctg
cgcaacttcatcgaagaggccgccggtatctccaagtacaaggagcgccgccgagagacc
gagagccgcatccgccgcacccaggaaaacctggcgcgcctgaccgacctgcgtgaagaa
ctggaacgccagctggagcgtctgcaccgccaggcccagtccgcggagaagtaccaggag
ttcaaggccgaggagcgacagctcaaggcccagctcgctgcgctgaagtggcgggcgctg
aacgaccaggtcggccagcgcgaggcggtgatcggcaaccaggaagtcagcttcgaagcc
ttggtggccgagcaacgcaacgcagacgccagcatcgagcgcctgcgcgatgggcatcac
gagctgtccgagcgctttaaccaggtgcagggtcgtttttattccgtagggggcgacatc
gcccgcgtggagcagagcatccagcacgggcagcagcgcttgcgccaattgcaggatgac
ctgcgtgaagctgagcgcgcccgtcaggaaaccgagtctcacctgggccacgaccggacg
ttgctcgccaccctgggcgaggaactggacatgctcggcccggagcaggagatgagcgct
gccgccgccgaagaggcagccgcccagctggaagaagctgaaaccggcatgcatgcctgg
caggaacagtgggacggcttcaaccagcgcagcgccgagccgcgccgccaggccgaggtg
cagcaggcgcgtatccagcagctggatcacagcctggagcgcctggtcgagcgtgagcgt
cgcctgaatgacgagagcgcccaactggccgccgacccggaggacgcggcggtgctggag
ctgagcgaagcgctcgcggtgggcgaactgcgcctggaagaactccaggcctccgaacag
ggcctggcagagcgcctggacagcgtgcgggacgagctgcagcaggcagccgcagtccag
cagcaggcccagggcgagttgcagcgcctgaatggtcgcatcgcttcccttgaggccctg
cagcaagccgcactcgaccctggcaagggggctgcgcaatggctgcgtgaacagcaactg
gccgaacgtccgcgactggccgaggggctgcgggtggagcagggctgggagctggcggtg
gaaaccgtcctcggcgctgatctgcaagccgtgctgctggacgatttcaatggccttgac
ctttccgctttcaaccagggcgagttgcgcctggccagcgccggcaagggcggcgcgcgg
gtacccggcagcctgctggacaaggttgaggccccgatggatctggcgccttggctggcc
aaggtccagccggtggagtccctggaacaggcgctggcccgtcacgccaatctggctgag
ggcgagagcctgatcagccgcgacggctactgggtggggcgcaatttcctgcgcgtacgt
cgtgccagtgaagctgaaagtggcctgctggccagaggccaggaactggagcgtctacac
gccgagcgcgaggagcgcgaggccgccctggagcagctggacgagcgcctgcagcacctg
cgtgacagccagcgccagcaggaagaagcgcgcgagcagcagcgccgccaactgcaggaa
gaagcccgcagcctgggcgagttgaaagcccgactgtctgcccagcaagccaaggtcgag
cagctcaccctgcggcgcaagcgcctggacgaagagcgcggcgagctggaagaacagcgc
tcccttgagcatgaacaattgggcgaagcgcgccttaccctgcaggatgcgctggatgcc
atggccaccgacaccgaactgcgcgagaaactgctggccgagcgtgacagcctgcgtgag
tgtctcgaccgcattcgtcaggaggcccgccagcacaaggaccatgcccaccagttggcc
gtgcgcgtcggtgcgctgcgcgcacaacacgactccacccgccaggccctggaacgcctg
gcgctgcagttcgagcgcttgaacgagcgtcgcgaacagctcagcctgaacctggaggag
ggcgccgcgccgctggaagagctgcgcctgaagctggaggaactgctggaaaagcgcctg
ggcgtggaggaagagttgaagttggcgcggctggccctggaagatgccgaccgcgaactg
cgcgacgccgagaagcgccgtacccaggccgaacagcaggcgcaactgctgcgtggccag
ttggagcagcagcgcctggaatggcaagccctgacggttcgccgcaagaccctgcaggaa
cagctctacgaagatggctacgacctgcacggggtgctcgccactctgccgggcgaggcc
agcgaaggcgcctgggaagaggagctcgaacggcttgcggcgcgaatccagcgtcttggg
ccgatcaacctcgcggccatcgacgagtaccagcagcagtccgagcgcaagcgctacctg
gacgcgcagaacgacgatctggtggaagccctggacacgctggaaaacgtcatccgcaag
atcgacaaggaaacccgcaaccgcttcaaggaaaccttcgatcagatcaacgcgggcctg
caggcgctgttccccaaggtattcggtggcggtcatgcctaccttgagctcaccggcgaa
gacctgctggataccggagtcgcaatcatggcgcggccgccgggcaagaagaacagcacg
attcacctgctgtccggcggggaaaaggcgctcacggccctggccctggtgttcgccatt
ttccagctcaacccggcaccgttctgcatgctggacgaagtggatgcgcccctggacgac
gcgaacgtcggccgttatgcgcgactggtgaaggaaatgtccgagaaagtgcaattcatc
tatatcacccacaacaagatcgccatggaaatggcggaccagttgatgggcgtgaccatg
cacgagcccggttgttcgcgcctggtggcggtggatgtggaggaggcgatgtcgatggtc
gaggcctag
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integrated database retrieval system
