Entry |
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Name |
(GenBank) lytic transglycosylase
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KO |
|
Organism |
pset Pseudomonas sp. TCU-HL1
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Brite |
KEGG Orthology (KO) [BR:pset00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:pset01011]
THL1_2119
Enzymes [BR:pset01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
THL1_2119
Peptidoglycan biosynthesis and degradation proteins [BR:pset01011]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
THL1_2119
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(2295957..2297891)
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AA seq |
644 aa
MRGRLLSLFSCLLLSTVGLQAAQAASASLAQQRLMYDEAKRALAKGDSGPYQRYASALRD
YPLEPYLAYDELTARLKWASNEEIEKFLAEHGDLPQAGWMKLRWLRWLADRGEWQTFVNH
YDPKLNFTELDCLFGQYQIKHGMKKEGYATAKKLWLVGKSQPEACDVLFGMWSAGGQLTE
ELRWKRAKLAAEARNYGLANHLVKTMPRLGTQGKLMVEVAQKPQLLSQTTRFAPADRHTA
DAAGLGLRRLARQDPEKALSLLEVYTARLPFSKAEKVAIAREIGLTLAKRFDSRALKVMT
QYDPELRDNTVSEWRARLLLRLGRWEDAYQLTRQMPQELAKTNRWRYWQARSLQLAQPQS
QQPIPLYQPVARERDFYGFMAADRIQAPYQLNNKPLALDPKVMQKVRNTAGIRRALEFHD
RGEIVNGRREWYHVSRLFNRDELVAQAKIAYDMQWYFPAIRTISQAQYWDDLDIRFPMAH
RGALTQQAKVRGLHSSWVFAITRQESAFMADARSGVGAMGLMQLMPGTAKETARKFGIPL
ASPQQAINPNVNIQLGAAYLSQVHGQFNGNRVLASAAYNAGPGRVRQWLRGANHLSYDVW
VETIPFDETRQYVQNVLSYSVIYGHKLNAPQPLVDWHERYFDDQ |
NT seq |
1935 nt +upstreamnt +downstreamnt
atgcgcggtcgtctgctcagcctgttctcctgtttgctcctctccacggtcggcctgcaa
gctgcccaggccgcatcggcctccctcgctcagcaacgcctgatgtacgacgaggccaag
cgcgccctggccaagggtgattccggcccttaccaacgctatgcaagtgccctgcgcgac
tatccgctggagccctaccttgcttacgacgagttgaccgcccgtctgaaatgggccagc
aacgaagagatcgagaagttcctcgccgagcacggcgacctgccccaggccggctggatg
aagttgcgctggctgcgctggctggctgatcggggcgaatggcagaccttcgtcaaccac
tacgaccccaagctcaacttcaccgaactggactgcctgtttggccagtaccagatcaag
cacggcatgaagaaagaaggctacgccaccgccaagaagctctggctggtgggcaagtcc
caacccgaagcctgcgatgtgctgttcggcatgtggagcgccgggggccaactgaccgag
gagctgcgctggaagcgcgccaagctggcggctgaagcgcgcaactacggcctggccaat
catctggtcaagaccatgccgcgcctgggcacccagggcaagctcatggtggaagtcgcg
caaaagccccaactgctcagccagaccacccgtttcgcacccgcggaccgccacacggcg
gatgccgccggcctgggcctgcgccgcctggctcgccaggacccggaaaaggccctgagc
ctgctagaggtctatacggcgcgactgcctttctcaaaggcggagaaagtcgcgattgca
cgagaaatcggcctgacgctggccaagcgcttcgactcccgcgccctcaaggtcatgacc
cagtacgaccctgagctccgggataacaccgtcagcgaatggcgcgcccgcctgctgctg
cgcctgggacgctgggaagacgcgtaccagttgacccggcaaatgccccaagaactggcc
aagaccaaccgctggcgctactggcaagcgcgaagcctgcaactggcccagccacagagc
cagcagccgattccgctctatcagccggttgcccgcgagcgcgacttctacggcttcatg
gccgctgaccgcatccaggcgccttaccagttgaacaacaagccgctggccctggacccc
aaggtgatgcagaaggtgcgcaacaccgctggtatccgccgcgcgctggaattccatgac
cgtggcgagatcgtcaacggccgccgcgagtggtaccacgtcagccgcctgttcaaccgc
gacgagctggtcgcccaggccaagatcgcctacgacatgcaatggtacttcccggccatc
cgcaccatcagccaggcgcagtactgggacgacctggatatccgcttcccgatggcccac
cgcggcgccctgacccaacaggccaaggtgcgcggcctgcattccagctgggtcttcgcg
atcacccgtcaggaaagcgccttcatggccgatgcccgctccggcgttggcgccatgggt
ctgatgcagctgatgccgggcacagccaaggaaaccgcacgcaagttcggcattccgctg
gcatcgccacagcaggcgatcaatcccaacgtcaacatccagctcggcgcagcctacctg
agccaggtccacggccagttcaacggcaaccgcgtgctcgcctcggcggcctacaacgcc
ggccctggccgtgtacgccagtggctgcggggcgccaaccacctgtcctacgacgtctgg
gtggaaaccattcccttcgacgaaacccgccaatacgtgcagaacgtgctgtcctactcg
gtaatctacgggcacaaactcaatgccccccagcccctggtggactggcacgagcgatat
ttcgacgatcagtga |