KEGG   Pseudomonas sp. TCU-HL1: THL1_2205
Entry
THL1_2205         CDS       T05373                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset00061  Fatty acid biosynthesis
pset00071  Fatty acid degradation
pset01100  Metabolic pathways
pset01212  Fatty acid metabolism
pset02024  Quorum sensing
pset04146  Peroxisome
Module
pset_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pset00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    THL1_2205
   00071 Fatty acid degradation
    THL1_2205
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    THL1_2205
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    THL1_2205
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pset01004]
    THL1_2205
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pset04147]
    THL1_2205
Enzymes [BR:pset01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     THL1_2205
Lipid biosynthesis proteins [BR:pset01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   THL1_2205
Exosome [BR:pset04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   THL1_2205
  Exosomal proteins of breast cancer cells
   THL1_2205
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: AOE84753
UniProt: A0A1B3E5C4
LinkDB
Position
2388935..2390602
AA seq 555 aa
MADAVRLPLEMFFEREARHPNKRYLVQPLGGGRLEELTWADVGEQARRAASWLRGRELPQ
GSRIAIISKNCAHWIVADLAIWMAGHVSVPLYPNLTADSVRQVLEHSESALAFIGKLDDW
PSMASGVPTGVPTVALPIHPVGEFEFSWSDLQACNPIQDSPKGAPDQLATIIYTSGTTGT
PKGVMHNFSNFAFAASHGVQLFQTGEDDRLLSYLPLCHVAERMFVEMGSLYAGQTVFFAE
SLDTFLDDLRRARPTAIFGVPRIWTKFQMGVYSKMPAQKLDRLLRLPVIGRMIGRKVLAG
LGLDAVRNALCGAAPVPEALLNWYKRLGLEVLEVYGMTENCGYSHLCRKGEVKPGWIGRY
SPGVEVRISEEGEVQVRSGATMQGYYKDPVRTAETLTDDGYLRTGDKGEQDANGNLRLTG
RIKEIFKTSKGKYVAPAPIENRLAVHPRIEQVCVVGDGLPQPMALCVLSEVGRQEAANSA
RAELEVSLRGLLEEVNGVLDKHERLHGLVLVKEVWAVDNGFLTPTLKIKRNMVEDAYGKR
FPEWIERQEAVLWHE
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtggctgatgcagtccgtttgccgcttgaaatgttctttgagcgtgaagctcgtcacccg
aacaagcgctacctggtccagccactcggcggcggccggctcgaagagctgacctgggcc
gacgtgggcgagcaggcccgccgtgcagccagctggctgcggggcagggagctaccccag
ggcagccgaatcgcgatcatttccaagaactgcgcccactggatagtcgccgacctggcg
atctggatggccgggcatgtttccgttcccctctatcccaacctcacggccgactcggtc
cgccaggtgctggaacactctgagtcggcgctggcgttcatcggcaaactcgacgactgg
ccgtccatggccagtggcgtgcccacaggcgtcccaaccgttgccctgcccatccatccc
gtgggtgagttcgagttcagttggtcagacctgcaggcctgcaatccgatccaggacagc
cccaagggcgctcccgaccagctcgccaccatcatctacacctccggcaccacgggcacg
cccaagggggtgatgcacaacttcagcaacttcgccttcgccgccagccatggcgtgcaa
ctgttccagactggcgaggatgaccgcctgctgtcctacctgccgctctgtcacgtggcc
gagcgcatgttcgtcgagatgggatcgctctatgccgggcagacagtgttcttcgccgag
agcctggacaccttccttgacgatctgcgccgcgcccggcccaccgccatcttcggcgtg
ccgcggatctggaccaagttccagatgggcgtctattccaagatgccggcgcagaagctc
gatcgcctgctcaggctgcccgtcatcggccgcatgatcgggcgcaaggtgctcgccggc
ctcggcctggatgccgtacgcaacgccctgtgcggcgccgcgccggtgcccgaggcgttg
ctgaactggtacaagcgcctcggcctggaggtgctggaggtctacggcatgaccgagaac
tgcggctactcccacctgtgccgcaagggcgaggtgaagcccggctggatcggccgctac
agccctggcgtggaagtgcgcatcagtgaagagggcgaagtgcaggtgcgcagcggtgcc
accatgcagggttactacaaggaccctgtccgcacggccgaaactctcaccgatgacggc
tacctgcgcaccggcgacaagggtgaacaagacgccaatggcaacctgcgcctgaccggg
cgtatcaaggaaatcttcaagaccagcaagggcaagtacgtggccccggcgcccatcgag
aatcgcctggcggtgcatccgcgcattgagcaggtctgcgtggtgggcgatgggctgccg
cagcccatggccctctgcgtgctgtccgaggtcggccgccaggaggcggccaacagtgcc
cgcgctgagctggaagtcagcctgcgcggcctgctggaggaggtcaacggcgtactcgac
aagcacgaacgcctgcacggtctggtgctggtcaaagaggtctgggcagtggacaacggc
ttcctcacacccaccctgaagatcaagcgcaacatggtggaagacgcctacggcaagcgc
ttcccagaatggatcgagcgtcaggaagcggtgctctggcacgaatga

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