Entry |
|
Name |
(GenBank) histidine kinase
|
KO |
K20973 | two-component system, sensor histidine kinase SagS [EC:2.7.13.3] |
|
Organism |
pset Pseudomonas sp. TCU-HL1
|
Pathway |
pset02025 | Biofilm formation - Pseudomonas aeruginosa |
|
Brite |
KEGG Orthology (KO) [BR:pset00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THL1_2326
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
THL1_2326
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:pset01001]
THL1_2326
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:pset02022]
THL1_2326
Enzymes [BR:pset01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
THL1_2326
Protein kinases [BR:pset01001]
Histidine kinases
Other
THL1_2326
Two-component system [BR:pset02022]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
THL1_2326
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2511394..2513718)
|
AA seq |
774 aa
MDIPLTQRLSFKQASLTVLVAFILGTVLSFVQVASDYFNENASIDREIKALLEIAHSPAA
RIAYNIDAELAQELVLGLLRSPAVIRAEIIDNNGAVLASVSRPRTESDFRIFSDYLFGER
REFEDPLYIVHAPNETLGVLRLEVDTFAFGSHFLRRAMFTLLSGFVRSLLLSLILLVLFY
SMLTKPLVQLIRNLSERDPRAAPDAKLPCPPGHEQDEIGVLVEVINRQLASLSVEMQQRR
EADQRLNQYLAELENIVSARTAELKAVNSRLSRYNQELEVARSTALEMAKARAAFLANMS
HEIRTPLNGLLGMLDLALDGPLNGEQRRQLQIAHDSGSVLVELLNDILDLSKFEAGQLEL
EQIPFDLGTLVEDTANLLSQNTAAGVELTCLIDPQLPSLVVGDPTRVRQVISNLLSNALK
FTRSGRVDVRAAPSPGGVLITIRDTGIGISAEALPKLFQPFSQGSAGITRQFGGTGLGLA
LTRHLCEAMQGQLDVKSQEGLGSQFSAELPLVEHSPPEPRAPMKGKVIALCGAKSGLAQM
LGTWLPLWGLEFERRDQDADLSGAQADVLISDSPDCLENVRRTALLPILLVTGYGSFLPP
PRAATLTPLHQLARPLSRAALYQALQRVLMQLPEESPSPAPAPVEPEIRNARVLLVEDNA
VNQLVAKGMLAKLGCEVLLAGHGAEALSRLEQTAVDLVLMDCNMPVMDGYEATRRIRQSG
RWPDLPIIALTANALPDERERCRAAGMDDYLAKPFRREELVALLDTWLPAKATP |
NT seq |
2325 nt +upstreamnt +downstreamnt
atggatattccgctgacacaacggctgtcgttcaagcaggccagcctgaccgtgctggtg
gcattcatcctcggcaccgtactcagtttcgtccaggtcgccagcgactatttcaatgag
aacgcctcgatcgatcgcgagatcaaggccctcctcgaaatcgcccacagccctgccgcg
cgcatcgcttacaacatcgacgccgaactggcccaggagctggtgctgggcctcctgcgc
tcgccggcggtgattcgcgccgagatcatcgacaacaacggcgcggtgctggccagcgtc
agccgtccacgcaccgaaagcgacttccgcatcttcagcgactacctgttcggtgaacgc
cgcgagttcgaagacccgctttacatcgtccatgcacccaacgaaaccctcggcgtcctg
cgcctggaagtggacaccttcgccttcggcagccacttcctccgtcgtgccatgttcacc
ctgctcagcggcttcgtacgcagcctgctgctgtcgctgatcctgctggtgctgttctac
agcatgctgaccaagcccctggtgcaactgatccgcaacctcagcgaacgggacccacgc
gcggcgccggacgccaagctgccctgtccccccggccacgagcaggatgaaatcggggtg
ctggtggaagtgatcaaccgccaactggccagcctgtctgtcgagatgcagcagcgccgc
gaggcggatcaacgactcaaccagtacctggccgagctggagaatatcgtctcggcgcgc
accgccgaactgaaggccgtcaacagccggctcagccgctataaccaggaactggaagta
gcgcgtagcaccgcattggaaatggccaaggcgcgcgccgctttcctcgccaacatgagc
catgaaatccgcaccccgctcaacggcctgctgggcatgctggacctggcgctggacggt
ccgttgaacggcgaacagcgccgccagctgcagatcgcccacgactcgggcagcgtgctg
gtggagctgctcaacgacatcctcgacctgtccaaattcgaagccggccaactggagctg
gaacagatcccctttgacctgggcaccctggtggaagacaccgccaacctgctttcgcag
aacaccgccgcgggcgtcgaactgacctgcctgatcgacccgcaactgccatcactggtt
gtcggcgacccgacgcgggtgcgccaggtgatcagcaaccttctgtccaacgccctcaag
ttcacccgctccgggcgcgtcgacgtgcgcgccgcgcccagccccggcggcgtactgatc
accatccgcgacaccggcatcggcatctccgccgaagccctgcccaagctgttccagccc
ttttcccagggcagcgcaggaattacccgccagttcggcggcaccggcctcggcctcgcg
ctcacccgacacctgtgcgaagccatgcagggccagctggacgtcaagtcacaggagggt
ctgggtagccagttcagcgccgaactgccgctggtcgaacacagcccaccggagccgcgc
gcgcccatgaaaggcaaggtcatcgcactgtgcggcgccaagagcggcctggcccaaatg
ctcggcacctggctgccgctttggggcctggaattcgagcggcgcgaccaggacgccgac
ctcagcggcgctcaggccgacgtgctgatcagcgacagccccgattgcctggagaacgtg
cgcaggaccgccctgctccccatcctgctggtcaccggctacggcagcttcctgccgcca
ccgcgggcggccaccctgacgccgcttcaccagctggctcgtcccttgtcgcgtgcggcg
ctctaccaggcgctgcagcgggtactgatgcagctccccgaggagtcgcccagcccggcg
ccggcccccgtcgagccagagatccgcaacgcacgggtgttgcttgtggaagacaatgct
gtcaaccaactcgtggccaagggcatgctggccaagctgggctgcgaggtcttgctggca
ggccacggcgccgaagccctgagccgcctggagcagaccgccgtcgacctggtgctgatg
gactgcaacatgcctgtgatggacggctacgaggcgacccggcgcattcgccagagcggt
cgctggcctgacctgcccatcatcgccctgaccgcgaacgccctgccggacgaacgtgag
cgctgccgtgctgccggcatggacgactacctggccaaacccttccgccgcgaggagctg
gtggccctgctggacacctggctacccgctaaagcgaccccatga |