Pseudomonas sp. TCU-HL1: THL1_3157
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Entry
THL1_3157 CDS
T05373
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THL1_3157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_3157
Enzymes [BR:
pset01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
THL1_3157
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THL1_3157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOE85705
LinkDB
All DBs
Position
3344269..3345081
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLEALIAKHRPDVIGLQETKVSDDQFPEADIRQLGYHVHYHGQK
GHYGVALLSRQEPLSLSKGFPGDAEDAQRRFIYGTFADAQGNPVTVMNGYFPQGESRDHP
VKFPAKERFYADLQVLLEQQFQPNQPLVVMGDINISPEDNDIGIGEENRKRWLKTGKCSF
LPEEREWLARLKSWGLVDSFRHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDVILATSPL
QARIKDAGIDYDLRGMEKPSDHAPIWLELA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtttctttcaatatcaacggcctgcgggcacgtccgcaccagctcgaagca
ctgatcgccaagcaccggccggatgtgatcggcctgcaggaaaccaaggtctccgacgat
cagttcccggaagccgacattcgccagctcggctatcacgttcattaccacggccagaaa
ggtcattacggcgtggcgctgctctcccgccaggagccgctatcgctgtccaagggcttc
cctggtgacgccgaggatgcccagcgccgcttcatctacggcaccttcgccgatgcacaa
ggcaatccggtgacggtaatgaatggctacttcccccagggtgaaagccgcgatcatccg
gtcaagttcccggccaaggagcgcttctacgccgatctgcaagtgctactggagcagcag
ttccagccgaaccagccattggtggtgatgggcgatatcaatatctcgccggaagacaac
gacatcggcattggcgaagagaatcgcaagcgctggctgaagaccggcaagtgcagcttc
ctgccggaagagcgcgagtggctggcacgtctcaagagctggggcctggtggacagcttc
cgccacctcaaccccgaggtgaacgaccgtttcagctggttcgactaccgtagccgcggc
ttcgaagacgaacccaagcgtggcctgcgcatcgacgtgatcctggccaccagcccgcta
caggcgcggatcaaggacgccggtatcgactacgacctgcgcgggatggagaaaccgtcc
gatcacgcgccgatctggctggagcttgcctga
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