Pseudomonas sp. TCU-HL1: THL1_3373
Help
Entry
THL1_3373 CDS
T05373
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02010
ABC transporters
pset03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THL1_3373
03070 Bacterial secretion system
THL1_3373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pset02000
]
THL1_3373
02044 Secretion system [BR:
pset02044
]
THL1_3373
Transporters [BR:
pset02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
THL1_3373
Secretion system [BR:
pset02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
THL1_3373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_18
PRK
AAA_30
AAA_21
MeaB
DUF87
Motif
Other DBs
NCBI-ProteinID:
AOE85921
UniProt:
A0A1B3E8Q6
LinkDB
All DBs
Position
complement(3579046..3581130)
Genome browser
AA seq
694 aa
AA seq
DB search
MLARFHNIAASPEQLVHEFADSGRPFGKSELLLAASKLGLKAKSVRSHLERLPNAPLPAI
AVSQDGGFFILARIDNDKALIQDPRVQRPEVLSLEALTACWTGELLLIRSEASVAGELSK
FDFTWFIPAIVKYRKLLGEVLLVSFVLQLFALVTPLFFQAVMDKVLVHRGLSTLDVIAIG
LLGIMLFESLLSGLRSYVFAHTASRIDVELGSRLFRHLVTLPLAYFQARRVGDSVARVRE
LENIRSFLTGNAITLVLDVLFSVVFIAVMFVYSGWLTLVVVLSLPLYFLISLFITPVLRA
RLNESFTRGAENQAFLVETVNGIDTLKALAVEPQVTRKWDNQLAGYVAASFKTQTLSTLA
NEGVGLVGKLVTVATLWLGARLVIDGDLSVGQLIAFNMLAGRVSQPIMRLAQLWTNFQQT
GVSVQRLGDILNTRTELSQAARSALPPLKGRIEFDQVHFRYRSDGSEVLRGISLQIPPGE
VIGVVGRSGSGKSTLTRLLQRLYTPERGRVMVDGMDLALADVSSLRRQIGVVLQDNILFN
RSIRENIALTDAGAPIELVIQAAKLAGAHEFILELPEGYDTVVGEHGASLSGGQRQRIAI
ARALMGNPRILIFDEATSALDYESERIIQQNMQSICQGRSVIIIAHRLSAVRDAHRIVVM
DRGQIVEEGTHAELLTHQAGHYSRLHRLQQGGAA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcggtttcacaatatcgccgcgtctccagagcaactggtgcatgagttcgcc
gacagcggtcgtccctttggcaagtccgagctgttgctggcggcaagcaaactaggcctg
aaggccaagtctgttcgcagtcatctcgaacgcctcccaaatgctccccttcccgcgatc
gccgtttctcaggacgggggcttcttcatactcgcccgcatcgacaacgacaaggcgctg
attcaggacccgagagtgcagcgtccagaggtgttgagccttgaggcactaaccgcatgc
tggaccggcgagttgctgctgatccgctccgaggcctcggtggccggcgagttgagcaag
ttcgatttcacctggttcatcccagccatcgtcaaataccgcaagctgctgggcgaagtt
ctgctggtgtccttcgtgctgcagctctttgccttagtcacaccactgttcttccaggcg
gtgatggacaaggtgctggtccatcgcggcctatccactctggatgtgatcgccattggc
ctgctcggtattatgctgttcgagtcattgctctcgggcctgcgcagctacgtgttcgcc
catacagccagccgcatcgacgttgagcttggctcgcggctgtttcgccatcttgtgacc
ctgccgttggcctattttcaggcacgtcgggtgggggattcagtggcacgggtacgcgag
ttggagaacatccgcagcttcctcaccgggaacgccattaccctggtcctcgacgtgttg
ttctcggtggtgtttatcgccgtgatgtttgtctacagcgggtggctgacgctggtcgtg
gtgctgtccctgccgctgtatttcctcatctcgctgttcatcacccccgtattgcgggcg
cgtctaaatgaaagcttcacccgtggggcagagaatcaggccttcctggtcgagacggtg
aacggtatcgacacgctgaaagccctggcggtggagccgcaggtcacccgcaaatgggac
aaccagttggccggctacgtggcggcgagcttcaagacccagaccctgtcgaccctggcc
aatgagggcgtcggcttggtcggcaagctggtcaccgtggcgaccctgtggctcggggcg
cggctggtgattgatggtgacctctcggtgggccagctgatcgccttcaacatgctggcc
ggacgtgtctcgcagccgatcatgcgcctggcccagttgtggaccaacttccagcagacc
ggggtctcggtccagcggctgggcgatatcctcaatacccgcaccgagttgagccaggcc
gcccgcagtgctctgccgccgctcaaggggcggatcgagttcgaccaggtgcacttccgc
taccgctccgatggctcggaggtcctccgcggcatcagcttgcagatcccgccgggggag
gtgattggggtggtcggtcgttcaggttcaggcaaaagcactttgactcgcctgctgcag
cggctctacacccctgagcgtggacgggtgatggtggacggtatggacctcgccctagcc
gatgtgtcctcgctgcgccggcagatcggtgtcgtgctacaagacaacatactgttcaac
cgcagcatccgcgagaacatcgcgctgaccgatgctggcgcccccatcgaactggtgatc
caggcggccaagctggccggcgcccatgagttcatcctcgaactgccggagggctatgac
accgtggtgggtgaacacggggcgtccctgtccggtggccagcgtcagcgcattgccatc
gcccgcgccctcatgggcaatccgcgcatcctgatcttcgacgaggccaccagcgccctg
gactacgagtccgagcggatcatccagcagaacatgcagagcatctgccagggtcgctcg
gtgataatcatcgcccaccgcctgtccgcggtgcgcgatgcgcaccgcatcgtcgtgatg
gaccgcggacagatcgtcgaggaaggcacccatgcggagctgctcactcatcaggcaggg
cactattcgcgcttgcaccgcttgcaacaaggcggtgccgcatga
DBGET
integrated database retrieval system
