Pseudomonas sp. TCU-HL1: THL1_3407
Help
Entry
THL1_3407 CDS
T05373
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_3407
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
Other families
THL1_3407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
GAF_3
AAA_2
HTH_50
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AOE85955
LinkDB
All DBs
Position
3619091..3620641
Genome browser
AA seq
516 aa
AA seq
DB search
MTTHTFLQTLIPLVSDLSRELPERERYRRLLEALRGLLPCDATALLRLDGDQLVPMAVDG
LSQDTLGRRFKVSEHPRLRALMESRGVTRFAADCGLPDPYDGLVEGHQEHLEVHDCMGCP
LYLDDRPWGVLTLDALDPSRFDGQDLEILEGFASLAAATVKAAERMDTLTRLAQDEQQLA
EVYRQAAGQVRPQEMIGHSASHKALVEEIKLVGGSELTVLISGETGVGKELVAQSIHSRS
LRSRHPMISLNCAALPDTLVESELFGHVRGAFSGAVNERKGKFELADEGTLFLDEVGELP
LATQAKLLRVLQSGQLQRVGSDREHRVNVRVIAATNRDLAEEVRAGRFRADLYHRLSVYP
LRVPPLRERGRDVLLLTGFFLEENRARLGLRSLRLSQDAQAALLGYDWPGNVRELEHLIG
RAALKALAACAERPRILTLTANDLALPGNQPSIAARSAEAPEAAAVGDLREAIDQYQRQL
IATSLARQQQNWAASARELGLDRANLLRLAKRLGIK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccacactttcctgcaaacactgatccccctggtcagtgacctgtcccgcgaa
ctgcccgaacgcgagcgctatcgccgcctgctggaagccctgcgtggcttactgccatgc
gacgccactgccctgctccgcctcgatggcgaccagttggtccccatggccgtagacggc
ctcagccaggacacgctgggtaggcgcttcaaggtgtccgaacaccccaggttacgtgcc
ttgatggagagtcgcggtgttacccgcttcgctgctgactgcggcctgcccgacccctac
gacggcctggtggaaggtcatcaggagcacctggaagtacacgattgcatgggctgcccg
ctctacctcgatgatcgcccctggggcgtcctgaccctcgatgcattggacccgtcgcgt
ttcgacggacaggacctggaaatcctcgaaggtttcgccagcctggccgccgccacggtg
aaagcagccgaacgcatggacacgcttacccgcctcgcccaggacgaacagcagctggcg
gaggtctatcgccaggcggccgggcaggttcgaccgcaggagatgattgggcatagcgcg
agccataaggcactggtagaggagatcaagctggtaggcggcagcgaactgacggtattg
atcagcggagaaaccggagtcggcaaggaactggtcgcccaatccattcatagccgctcg
ctgcgctcccgacaccccatgatcagcctcaactgtgccgccctgcccgacaccctggtg
gagagcgagttgttcggtcatgtgcgtggcgccttctctggcgcagtgaacgaacgcaaa
ggcaagttcgagctggccgatgaaggcaccctgttcctcgatgaggtcggagagctgcca
ttggccacccaggccaagctattgcgtgtgctgcagagtgggcaattgcagcgggtcggt
tcggaccgcgaacaccgcgtcaatgtgcgggtcattgccgccaccaaccgcgacctcgca
gaggaagtgcgtgccggccgtttccgggccgacctctatcaccggctcagcgtctatccc
ctgcgcgttcctccccttcgtgagcgtggccgcgacgtcttgctgctgacgggcttcttc
ctcgaagagaatcgcgcccggctcggtctgcgcagcttgcgcctcagccaggatgcccaa
gctgcgctgctcggctacgactggcctggcaatgtacgggaactggaacacctgattggc
cgcgcagcgctcaaggccttggcagcctgcgccgagcgaccgcgaatcctcaccctgacg
gccaacgacctcgccttgcccggcaaccagccgagcatagccgctcgttcggcagaagca
ccggaggctgcagcggttggtgatttgcgcgaggccattgaccagtaccaacgccaactg
atcgccaccagcctggcgcggcaacagcagaactgggcagcttcagcccgtgaactgggc
ctggatcgggccaacctgctacgcctggccaagcgactgggaatcaaatga
DBGET
integrated database retrieval system
