Pseudomonas sp. TCU-HL1: THL1_3502
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Entry
THL1_3502 CDS
T05373
Name
(GenBank) type IV secretion system protein VirD4
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
THL1_3502
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
AOE86050
UniProt:
A0A1B3E933
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All DBs
Position
3730683..3732674
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AA seq
663 aa
AA seq
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MQAATVLYGQVLVVLAITLSGVWGATQWTAAALGYQARLGAPWFEWLGTPLYHPWRLFEW
WFYFDAYAPDVFNVGGSIAACSSLLALGVAIGMAIWRARQARQVTTYGSARWADREEVRQ
AGLTRPAGVFLGLFEEQYLRHEGPEHVLAFAPTRSGKGVGLVVPTLLSWPASAVIHDIKG
ENWSLTAGWRSRFSHCLLFNPTDPASAAYNPLLEVRRGTHEVRDVQNIADILVDPEGALE
RRNHWEKTSHALLVGAILHVLYAGQDKTLRGVANFLSDPACTFELTLHRMMTTPHLGDAP
HPVVASAAREVLNKSENERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEYPVS
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLEGTDGIERRHKLLLMLDEFPAMGRLDFF
ESALAFMAGYGLRAFLISQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPTDESVVMLSGHAPIRA
KKLRYFADTNFRRRVLPAPQLQPGRYADAPAARSDDWSALAMPTTIGIPPAGLAGGESLE
DGGPRHQPELAEVAQLLDPDELSSDLLLLDEDDTPAPFPTQPDPRLQRAARLTALDPDDG
IAL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcaacggtgctgtatggccaggtactggtggtgctggccattactctttcc
ggggtgtggggtgccactcagtggaccgctgccgcactgggctaccaggctcgcctggga
gcgccctggttcgaatggctgggcacaccgctttatcacccttggcgactgttcgagtgg
tggttctacttcgatgcctacgcgccggacgtcttcaatgttggcggtagcatcgccgcc
tgcagcagcctgctggcattgggggtggccatcggcatggccatctggcgtgcacgccag
gctcggcaggtcacgacctacggctcggcgcgctgggccgatagggaggaggtgcgccag
gccgggctgacccggccggcgggtgtgttccttggtctgttcgaggagcagtacctgcgc
cacgaaggccccgagcacgtgctggccttcgcgccgacgcgttcgggcaagggcgtcggt
ctggtggtgcccaccctgctctcttggccggcctcggcggtcatccacgacatcaagggc
gagaactggagcctgaccgccggctggcgctcgcgcttctcccactgcctgctgttcaac
cccaccgatccggcctcggcggcctacaacccgctgctggaggtgcgtcgcggcacccac
gaagtgcgcgatgtgcagaacatcgccgatatcctggtcgacccggagggcgcgctggag
cggcgcaatcactgggaaaagaccagccatgcgctgctggtcggcgccatcctgcatgtg
ctctatgccggccaggacaagaccctgcgtggcgtcgccaactttctctctgaccctgcc
tgcaccttcgagctgactctgcaccggatgatgaccacgccccatctgggcgacgcgccc
cacccggtggtggcttcggccgcgcgcgaggtgctgaacaagagcgagaacgagcgctcg
ggggtgctgtccacggccatgtccttcctgggcctgtaccgggaccccacggtggccgaa
gtcacgtcgcgttgcgactggcgcatcgccgacctcatcgcggccgagtatccagtctcg
ctgtacctggtggtgccgccctcggacatcagccgcaccaagccgctgatccgcctgatc
ctcaaccagatcggccggcgcctgaccgagtcgctcgagggtaccgacggcatcgagcgt
cggcacaagttgctgctgatgctcgacgagttccccgcgatggggcggctggatttcttc
gaatcggccctggccttcatggccggctacgggctgcgcgccttcctcatctcgcagtcg
ctcaaccagatcgacaaggcctacggccagaaccactcgatcctcgacaactgccatgtg
cgagtgaccttcgccaccaacgacgaacgcaccgcgaagcgcatctccgagacgttgggc
actgccaccgagttgcgtgcgcaacgcaactatgccggccaccgtctcgcgccctggctg
ggccacctgatggtgtcgcgccaggagaccgcgcgcccgctgctgacgccgggcgaggtg
atgcaactgcctaccgacgagtcggtggtgatgctctccggccacgcaccgatccgggcg
aagaagctgcgctatttcgccgacacaaacttccggcgccgggtactgccagcgccgcaa
ctgcagcctggacgttatgccgatgcccccgccgcacggtcggacgattggagtgccctg
gcaatgccaacgaccatcggcattccgccggccggattggccggcggcgaatctctcgaa
gatggcggtcctcgccatcagcccgagctggcggaagtcgcccagttgcttgatccagat
gaactgtccagcgacctgctcctcctcgacgaggacgacacccccgcccccttccctacc
cagcctgatccgcgcctgcaacgtgctgcgcggctgactgccctcgaccctgacgatgga
attgccctatga
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