Pseudomonas sp. TCU-HL1: THL1_3884
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Entry
THL1_3884 CDS
T05373
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pset03032
]
THL1_3884
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_3884
Enzymes [BR:
pset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
THL1_3884
DNA replication proteins [BR:
pset03032
]
Prokaryotic type
DNA Topoisomerases
THL1_3884
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THL1_3884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AOE86432
LinkDB
All DBs
Position
complement(4147911..4150688)
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AA seq
925 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLALMDNAELTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARAEIEDMEKGGGRQQIIVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVGEVVLNNLYSQTQMQSVFGINVVALVDGRPRTLNLKDMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA
VEAMVERAGADSCRPEDLDPQYGLREGKYYLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILTLIGELIRILTSPERLMEVIREELEKVKAEFGDARRTEIVASQVDLTIADLITEEER
VVTISHGGYAKSQPLAAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLEENEGVV
IEGEVIEAEGGDEEGADLDDEQDEPTGAYIFMATAFGTVKKTPLVQFSKPRSNGLIALKL
EEGDTLIAAAITDGAKEVMLFSDGGKVIRFKEKHVRTMGRTARGVRGMRLPEGQSLISML
IPELGAQILSASQRGYGKRTPLEDYPRRGRGGQGVIAMVTNERNGKLVGAVQVQDGEEIM
LISDQGTLVRTRVDEVSSSSRNTQGVTLIKLAKDETLVGLERVQEPSGGDEDDDLEEGID
ADVEAVDDVQGDDVQQDDAQPAGDE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgatcgtcgggcgtgccttgccggacgcgcgcgacggc
ctgaagccggtgcaccgtcgcgttctctacgcgatgagcgaactgggcaacgactggaac
aagccctacaagaagtccgcccgtgtggtcggtgacgtgatcggtaaatatcacccgcac
ggcgataccgcggtctacgacacaatcgtccgcatggcccagcctttctcgctgcgctac
atgctggtggacggccaaggcaacttcggctcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgtccaagctggcccatgaactcctggccgacctggacaag
gaaaccgtggactgggtgcccaactacgacggcaccgaacagattcccgcggttatgccg
accaaggttccgaacctgctggtgaacggttccagcggcatcgccgtgggcatggcgacc
aacattccgccgcacaacctgagcgaagtcatcgatggctgcctggcgctgatggataac
gccgagctcacggtcgatgagctgatgcagtacatcccgggcccggatttccccaccgcg
ggcatcatcaacggccgtgccggcatcattgaggcgtaccgcaccggtcgtggccgcatc
tatatccgtgcccgcgctgaaatcgaggacatggaaaagggcggcggtcgccagcagatc
atcgtcaccgagctgccctaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaggagaagaagctcgaaggcatcaccgaattgcgcgacgaatccgacaaggac
ggcatgcgcgtggtgatcgagctgcgccgcggtgaagtgggcgaggtggtgctgaacaac
ctctactcccagacccagatgcagagcgtcttcggtatcaacgtggtggccctggtcgat
ggccggccgcgcacgctgaacctgaaggacatgctcgaggtgttcatccgtcaccgccgt
gaagtggtgacccgtcgtaccgtctacgagctgcgcaaggcgcgtgagcgtggccatatc
ctcgaaggccaggccgtcgccctgtccaacatcgacccggtgatcgagctgatcaaggcc
tcgccgactccggccgaggccaaggaacgcctgatcgccaccgcctgggaatccagcgcc
gtggaagccatggtcgagcgcgccggcgccgactcctgccgtccggaagacctggacccg
caatacggcctgcgcgaaggcaagtactacctgtcgccggaacaggcccaggccatcctg
gagctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcaccctgatcggtgagctgatccgcatcctcaccagccccgagcgcctgatg
gaagtcatccgcgaagagctggagaaagtgaaggccgagttcggcgacgcccgccgcacc
gagatcgtcgcgtcccaggtggacctgaccatcgccgacctgatcaccgaagaagagcgt
gtcgtcaccatctcccacggcggctacgccaagtcccagccgctggccgcctaccaggcc
cagcgccgtggtggcaaaggcaagtcggccaccggggtgaaagacgaggactacatcgaa
cacctgctggtcgccaacagccacgccacgctcctgctgttctccagcaagggtaaggtc
tactggctgcgcaccttcgaaatcccggaagcttcgcgtaccgcgcgcggtcgcccgctg
gtcaacctgctgccgctggatgaaggcgagcgcatcaccgccatgctccagatcgacctg
gaagccctgcagcagagcgcaggcgccgacgaggatctggaagagaacgaaggcgtcgtg
atcgaaggcgaagtcatcgaagccgagggcggcgacgaagaaggcgccgacctcgatgac
gaacaggacgagcccaccggcgcctacatcttcatggccaccgccttcggtaccgtgaag
aagacgccgctggtgcagttcagcaaaccgcgttcgaacggcctgatcgccctgaagctg
gaagagggtgacaccctgatcgccgcggccatcaccgacggcgccaaggaagtcatgctc
ttctccgacggcggcaaggtcatccgcttcaaggaaaaacacgtgcgcaccatgggccgt
actgcccgcggcgttcgcggcatgcgtctgccggaaggccagagcctgatttccatgctg
atccccgaactgggcgcgcagatcctctccgcctcccagcgtggttacggcaagcgcacc
ccgctggaagactacccgcgtcgcggtcgcggcggacaaggcgtgatcgccatggtcacc
aacgagcgtaacggcaagctggtcggcgctgtgcaggtgcaggacggcgaggagatcatg
ctgatttccgaccagggcaccctggtgcgtacccgtgtcgacgaagtctccagttccagc
cgcaatacccagggcgtgaccctgatcaagctggccaaggacgagaccctggttggcctg
gagcgtgttcaggagccgtctggcggtgacgaggacgatgatctggaagaaggcatcgat
gccgacgtagaggccgtggacgacgtccagggcgatgacgttcagcaggacgacgcccag
ccggctggcgacgagtaa
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