Pseudomonas sp. TCU-HL1: THL1_3970
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Entry
THL1_3970 CDS
T05373
Name
(GenBank) ATPase AAA
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02020
Two-component system
pset02025
Biofilm formation - Pseudomonas aeruginosa
pset02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THL1_3970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
THL1_3970
09142 Cell motility
02040 Flagellar assembly
THL1_3970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_3970
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pset02035
]
THL1_3970
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
Other families
THL1_3970
Bacterial motility proteins [BR:
pset02035
]
Flagellar system
Flagellar assembly proteins
Others
THL1_3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
AAA
nSTAND3
AAA_19
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AOE86518
UniProt:
A0A1B3EAG6
LinkDB
All DBs
Position
complement(4229490..4230962)
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AA seq
490 aa
AA seq
DB search
MWRETKILLIDDNSDRRRDFAVILNFLGEEYLSCASDDWRDATDSLSASRDVLCVMLGEV
NAKGGTLELIKQLLAWDEFLPVLLIGDQIQVEWPEDLRRRLLASLEMPPSYNKLLDSLHR
AQVYREMYDHARERGRQREPNLFRSLVGTSRAIQQVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEQMIEAGSFR
EDLYYRLNVFPIDMAPLRERVEDIPLLINELISRMEHEKRGSIRFNSAAIMSLCNHDWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRHVDDEDEQLKASLREEIEERSAIGAGLPG
VSAPALLPPEGLDLKDYLGNLEQGLIQQALDDASGVVARAAERLRIRRTTLVEKMRKYGM
SRRDEELAEE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgacgacaatagcgatcgccgccgcgatttt
gcggtgatcctgaatttcctcggggaagagtacctgtcctgtgccagcgatgattggcgc
gacgcaaccgattccctgagcgccagccgcgacgtcctgtgcgtcatgctgggcgaggtg
aacgccaagggcggcacgctggaactgatcaagcaactgctggcctgggacgagttcctg
ccggtgttgctgatcggcgatcagatccaggtggaatggcctgaagacctgcgccgccgc
ctgttggccagcctggaaatgccgcccagctacaacaagctgctcgattccctgcaccgc
gcccaggtctaccgcgaaatgtatgaccacgcgcgcgagcgtggccgtcagcgtgagccc
aacctgtttcgcagtctggtcggcaccagccgtgccatccagcaggtgcggcagatgatg
cagcaggtggccgatacggatgccagcgtgctgatcctcggcgagtccggcaccggcaag
gaagtcgtggcgcgcaaccttcactaccattccaagcgccgtgaagcgccgttcgtgccg
gtcaactgcggtgccattccggcggaattgctggaaagcgaactcttcggccatgagaag
ggcgccttcaccggcgccatcaccagccgggccgggcgcttcgagctggccaacggcggc
accctgttcctggacgagatcggcgacatgccgctgccgatgcaggtcaagctgctgcgc
gtgctgcaggaacgcaccttcgagcgggtcggcagcaacaagacgcagaatgtggacgtg
cgcatcatcgccgcgacccacaagaatctcgagcagatgatcgaggccggcagcttccgc
gaagacctctactaccgcctcaacgttttccccatcgacatggcgccgctgcgtgagcga
gtggaagacattccgctgctgatcaacgagctgatttcgcggatggagcatgagaagcgc
ggttccatccgcttcaactccgccgccatcatgtccctgtgcaaccacgattggccgggc
aacgtccgtgagctggccaacctcgtcgagcgcatggcgatcatgcatccgtacggcgtc
atcggcgtcagcgagctgccgaagaagttccgccatgtcgacgacgaggacgagcagctc
aaggccagcctgcgcgaggaaatcgaggagcgttcggccatcggtgccggcctgcctggt
gtcagtgctcccgcgctgctgccgccggaaggtctggacctcaaggactacctcggtaac
ctcgagcagggcctgatccagcaggcgctggacgatgcatccggcgtggtggcccgtgcg
gccgagcgcctgcgcatccgtcgtaccaccctggtggagaagatgcgcaagtacggcatg
agccgtcgcgacgaggaattggcggaagaataa
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