Pseudomonas sp. TCU-HL1: THL1_4055
Help
Entry
THL1_4055 CDS
T05373
Name
(GenBank) XRE family transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02020
Two-component system
pset02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THL1_4055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THL1_4055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pset02022
]
THL1_4055
Two-component system [BR:
pset02022
]
OmpR family
QseC-QseB (quorum sensing)
THL1_4055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GlnR_1st
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
AOE86603
UniProt:
A0A1B3EAM7
LinkDB
All DBs
Position
4344356..4345018
Genome browser
AA seq
220 aa
AA seq
DB search
MRLLLVEDDNALGAGVRTGLRQEGYTIDWLTDGASALHALQTEDFDLAILDLGLPRLDGV
QVLQKLRAGGSTLPVLVLTARDALEDRIIGLDAGADDYLVKPFDLNELKARLRALLRRSA
GRPQVLIEHAGVVLDPTSQQVSYQGNPVQLTPKEYQLLHELLSQPGKVLTRERLVQTLYG
WDEEAESNTLEVHIHHLRKKLSSDLIRTVRGIGYLVDARP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcttctcgtcgaagacgacaatgccctgggcgcgggcgtgcgcaccggtctg
cgccaggagggctacaccatcgactggctcaccgacggcgccagcgccctgcacgccttg
cagactgaagacttcgacctggccatcctcgaccttggcctgccacgcctggatggcgtg
caagtcctgcagaagctccgggccggcggctccaccctgcccgtgctggtactcaccgcc
cgcgacgcccttgaggaccgcatcatcggcctggacgccggcgccgacgactacctggtc
aaacccttcgacctcaatgaactcaaggcccgcctgcgcgccctgctgcgccgcagcgcg
ggtcggccgcaggtgctcatcgaacacgccggcgtggtactcgacccgaccagccagcag
gtcagctaccagggcaaccccgtgcagctgacgcccaaggagtaccagctgctccacgaa
ctgctctcgcaaccgggcaaggtactcacccgcgaacgtctggtgcagacgctctacggc
tgggatgaagaggccgaaagcaacaccctggaagtgcacatccaccacctgcgcaagaag
ctctccagcgacctcatccgcaccgtgcgcggcatcggctacctggtggatgcgcgccca
tga
DBGET
integrated database retrieval system
