Pseudomonas sp. TCU-HL1: THL1_420
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Entry
THL1_420 CDS
T05373
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03030
DNA replication
pset03430
Mismatch repair
pset03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THL1_420
03430 Mismatch repair
THL1_420
03440 Homologous recombination
THL1_420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pset03032
]
THL1_420
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_420
Enzymes [BR:
pset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THL1_420
DNA replication proteins [BR:
pset03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THL1_420
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THL1_420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOE82968
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All DBs
Position
complement(465208..465912)
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AA seq
234 aa
AA seq
DB search
MNGFPWFSRRTPLDPVIAARRDDLPEPLPLDERPLREQRFVVLDLETSGLNMSRDLVLSI
GAVSIDDGAIDLGNPFECTLQRDTGKLSSSVLIHGIAPSELAAGVAPAEALLGFMEFLGD
SPLLAFHATFDQRMLSRALKQDLDYRLRHCFLDIAELAPMLCPEAGIRNGGLDEWVDYFG
LQVQQRHNASADALVTAEITLILFSRARRHGLESPAALASELARWQRRQHAPAL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttttccctggttctcccgccgcacgccactggacccggtcatcgctgcccgc
cgcgatgacctgcccgagcccctgccactggacgaacgccccctgcgggaacagcgcttc
gtggtcctggacctggaaaccagcggcctgaacatgagccgcgacctggtgctgtccatc
ggcgcggtgagcatcgacgacggcgccatcgacctcggcaatccgttcgagtgcaccctg
cagcgcgacaccggcaagctcagctccagcgtgctgatccacggtatcgcccccagtgaa
ctggcggctggcgtggcgccggccgaagccctgctggggttcatggagttccttggcgac
agcccgctgctggccttccatgccaccttcgaccagcgcatgctgagccgcgccctcaag
caggacctcgactaccgcctgcgccactgcttcctcgacatcgccgaactggcgccgatg
ctctgccccgaagccggcatacgcaacggcggcctggatgaatgggtggactacttcggc
ctgcaggtccagcaacgccacaacgccagcgccgatgccctggtcaccgccgagatcacc
ctgatcctgttcagccgcgcccgccgccacggcctggaaagccctgccgcgctggcctcc
gaactggcccgctggcaacgccggcaacacgcgcccgcgctctga
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