Pseudomonas sp. TCU-HL1: THL1_4397
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Entry
THL1_4397 CDS
T05373
Name
(GenBank) peptidase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THL1_4397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pset02000
]
THL1_4397
02044 Secretion system [BR:
pset02044
]
THL1_4397
Transporters [BR:
pset02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
THL1_4397
Secretion system [BR:
pset02044
]
Type I secretion system
Multiple protein transporter
THL1_4397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
STAS
Motif
Other DBs
NCBI-ProteinID:
AOE86945
UniProt:
A0A1B3EBM2
LinkDB
All DBs
Position
complement(4743010..4744746)
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AA seq
578 aa
AA seq
DB search
MKNFSQPRTELSEALSGLRRTFYVVGGFSGVINLMMLAPALYMLQVYDRVLASSNITTLV
MLTVLMVGLYVLMSLLEVVRSTVLIRLGNRLDMGLNKRVFNASFERNLRRAGGNPAQALQ
DLSQVRQFLTGNGLFAFFDAPWTPIYLLVIFLVHPLLGIITLVGSVILFGLALLTEMVTR
GPLMEANQAAMSSGSFANNNLRNTEVIEAMGMLPAIRERWYGGYQRILEKQTQASDRAAY
ISGASRFVRITLQSLILGAGALLAIKGEITAGMMIASSILSGRAMAPVEQAIGVWKQLLS
ARGSWERLSKLLQDFPARKDAMALPKPQGALSVEQAMTAAPGGVATILRGINFSLSPGEA
LGIIGPSAAGKSTLARLLVGVWPAQGGKIRLDGADIFQWNKDELGPWIGYLPQDVELFEG
TIADNIARFGQVNSEEVILAAKRAGVHEMVLRFEKGYDTPLGVDGSPLSGGQKQRIALAR
AIYGDPSMIILDEPNANLDDVGEAALVEAILDLKKRGKTLILISHRPSVLSTVDKVLLLR
DGGMQLFGPREEVFAALRQASVMPSVGTPNLSSMRAKE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttctcgcagccccgtaccgagttatccgaggctcttagcggcttgcgccga
accttctatgtggttggcggtttcagcggtgtcatcaacctgatgatgctggcccccgcg
ttgtacatgctgcaggtttacgaccgcgtactggccagcagcaacatcaccaccctggtg
atgctgacggtcctgatggtcggactctatgtgctcatgtcattgctggaagtggtgcgt
tcgacggtgctgatccgccttggcaaccggttggacatgggcctgaacaagcgtgtcttc
aacgcgtccttcgagcgcaacctgcggcgtgccggcggcaacccggcccaggccctgcag
gacctgtcgcaggttcgccagttcctcaccggcaatgggctgttcgccttcttcgatgcg
ccctggacgcccatctacctgctggtgatcttcctcgtgcacccgctgctgggcatcatc
accctggtggggtcggtgatcctcttcggcctggcgctgctgaccgagatggtcacccgc
ggcccgctgatggaggccaatcaggcggccatgtcgtccggctccttcgccaacaacaac
ctgcgcaataccgaagtgatcgaggccatgggcatgctgccggcgattcgcgagcgctgg
tacggtggctatcagcgcatcctcgagaagcagacccaggcgtcggaccgcgccgcctac
atcagcggcgccagccgtttcgtgcggatcacgttgcagtcgctgatcctcggtgcgggg
gcactgctggcgatcaagggcgagatcaccgcggggatgatgattgccagttcgatcctc
agcggtcgtgccatggcgccggtggaacaggccatcggcgtgtggaagcaattgctgtcc
gcccgtggttcctgggagcgtctgtccaagttgctgcaggacttccctgcgcgcaaagac
gccatggcgctgcccaagccccaaggcgcgctgtcggtggagcaggccatgaccgccgcg
cccggcggcgtagcgaccatcctgcgcgggatcaatttcagcctgtcgccgggtgaggcg
cttggcatcatcggaccgtcggcggcgggtaaatccaccctggcccgcctgctggtcggc
gtctggccggcgcaggggggcaagatccgtctggacggcgccgatatcttccagtggaac
aaggatgaattgggcccctggatcggctacctgccccaggacgtggagctgttcgaaggc
accatcgccgacaacatcgcccgctttggccaggtgaacagcgaggaagtgatcttggcc
gccaagcgcgccggggtacacgagatggtcctgcgcttcgagaagggctacgacacaccg
ctgggcgtggacggcagcccgttgtccggtggccagaagcagcgtattgcactggcccgg
gccatctatggcgacccctcgatgatcatcctcgacgagcccaacgccaacctcgacgac
gtgggcgaagcggcactggtcgaggccatcctcgacctgaagaagcgcggcaagacgctg
attctgatttcccaccgccccagtgtgctcagcacggtggacaaggtcctgctgctgcgc
gatggcggcatgcagttgttcggtccccgcgaagaagtcttcgcggcgctgcgacaggcc
agcgtcatgccctcggtgggcacgcccaacctgtcgtcgatgcgggcaaaggagtaa
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