Pseudomonas sp. TCU-HL1: THL1_4469
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Entry
THL1_4469 CDS
T05373
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THL1_4469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_4469
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THL1_4469
RecFOR pathway proteins
THL1_4469
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
IMS_HHH
HHH_8
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AOE87017
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Position
complement(4835755..4836360)
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AA seq
201 aa
AA seq
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MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLL
YGFFEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKT
AERLLVELKDRFKAWETMPAIATLVVEPRVGVAVSSAESDALSALIALGFKPQEASRSVS
AIKEEGLSSEEMIRRALKGMV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgcctgcgcggcaccctggctgaaaagcaaccgccgcacctgatcctcgac
gtcaacggcttgggctatgagctggaagtgcccatgaccaccctgtatcgcttgccttcg
gtgggcgagccggtgaccctgcacacccatctggtggtgcgcgaggacgcgcacttgctc
tacggcttcttcgagaagcgcgagcgcgagctgttccgtgaactgatccggctcaacggg
gtggggcccaagctggcgctggcattgatgtccggcctggaagtagatgaactggtacga
tgcgtgcaggcccaggacacctcgaccctggtgaaaatacccggtgtgggcaagaaaacc
gccgagcgtttgctggtggagctcaaggatcgcttcaaggcgtgggaaaccatgccggcc
atcgccaccctggtggtcgaaccccgagttggcgtggcggtctccagtgcggagagcgac
gccctgagcgcgctcatcgccctcggtttcaagccccaggaggccagccgctcggtgtcc
gccatcaaggaagaggggctttccagcgaagaaatgatccgccgcgccctgaaaggaatg
gtgtaa
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