Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
pset Pseudomonas sp. TCU-HL1
|
Brite |
KEGG Orthology (KO) [BR:pset00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:pset03016]
THL1_4543
Enzymes [BR:pset01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THL1_4543
Transfer RNA biogenesis [BR:pset03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THL1_4543
Prokaryotic type
THL1_4543
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(4908550..4909608)
|
AA seq |
352 aa
MTELELLGPRAHGEALGQAQLKAVAEDFQVDEVLDIPLAGEGEHLWLWVEKRELNTEEAA
RRIARAAGVPLKVVSYAGLKDRQALTRQWFSLHLPGKSDPDLSGAENANLRILKSARHKR
KLQRGAHSANGFTLRLARLAADREALEQRLKRLAEAGVPNYFGLQRFGHGGGNVVDARAF
AERKELPVQRNVRSRLLSAGRSFLFNRVLAERVAAGTWNQAQVGDLLAFTDSRSFFAAGE
AECVDPRLAELDLHPTGPLWGAGASPAGGANQSVEQRVAAAEEALCRWLAEAGLEHERRI
LRLPIGGLTWHYPEPDVLQLEFVLPAGCFATAVVRELVDLLPAGQTENPCAF |
NT seq |
1059 nt +upstreamnt +downstreamnt
atgaccgaactcgaactgctgggcccgcgtgcccatggcgaggcgctggggcaggcccag
ttgaaagcagtcgccgaagacttccaggtcgacgaggtgctggatattcccctggcgggt
gagggggagcatctatggctctgggtggaaaagcgcgaactgaacaccgaagaggcggcg
cggcgtattgcccgcgccgccggcgtaccactgaaagtggtcagctacgccgggctcaag
gatcgccaggcgctgacccggcaatggttcagcctgcacctgccgggcaagtccgatccg
gatctgtctggtgcggagaacgccaacctgcgcatcctcaagagcgcccggcacaagcgc
aagcttcagcgcggcgcccattcggccaacggtttcaccctgcgtcttgcccgcctggcg
gctgatcgcgaggcgctggagcagcgcctgaagcgcctggcggaagctggtgtccccaac
tacttcggcctgcagcgtttcggtcatggcggcggcaacgtcgttgacgcccgtgccttt
gccgagcgcaaggagctgccggtgcagcgcaacgtgcgctctcgcctgctatcggcgggg
cgcagcttcctgttcaaccgcgtattggccgagcgcgttgccgctggcacctggaatcag
gcgcaggtcggcgatctgctggcctttaccgacagccgcagcttctttgctgccggcgag
gcggagtgcgtcgatccacgcctggcagaacttgacctgcacccgaccggaccgctctgg
ggcgctggcgcctcgcccgcaggcggggcgaatcaatccgtggagcaacgcgtggcggcc
gccgaggaggcattgtgccggtggcttgcagaagcgggactggagcacgaacggcgcatc
ctccgcctccccatcggcggcttgacgtggcattatcccgagcctgacgttctgcaactg
gaattcgtcctgccggctggatgcttcgccaccgcagtggtgcgtgagctcgtcgatctg
ctgccggcggggcagacggaaaacccatgcgcattctga |