Pseudomonas sp. TCU-HL1: THL1_4597
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Entry
THL1_4597 CDS
T05373
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00061
Fatty acid biosynthesis
pset00071
Fatty acid degradation
pset01100
Metabolic pathways
pset01212
Fatty acid metabolism
pset02024
Quorum sensing
pset04146
Peroxisome
Module
pset_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
THL1_4597
00071 Fatty acid degradation
THL1_4597
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
THL1_4597
09145 Cellular community - prokaryotes
02024 Quorum sensing
THL1_4597
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pset01004
]
THL1_4597
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pset04147
]
THL1_4597
Enzymes [BR:
pset01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
THL1_4597
Lipid biosynthesis proteins [BR:
pset01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
THL1_4597
Exosome [BR:
pset04147
]
Exosomal proteins
Exosomal proteins of breast milk
THL1_4597
Exosomal proteins of breast cancer cells
THL1_4597
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Homeodomain
Motif
Other DBs
NCBI-ProteinID:
AOE87145
UniProt:
A0A1B3EC72
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All DBs
Position
4968806..4970563
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AA seq
585 aa
AA seq
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MTTQQPPADLPSIPALLAWRITHTPDWPAAQVRDTDSWRTLDWGEVARRSETLAQALIAA
GVQPGDRVAIWSRTRLEWSLLDFAVLCVGAVSVGLYPSLSPAQAIQQLQRADCRLLFVEH
SAWALALDIQGLRVICLDPPAAGSGHQGLDAFLVQAGDIPTQQVRQRWQALDRDALANLV
FTSGTTGEPKAAMLSHGNLLASISAYTLPMPRYRSLAFLPMAHVGERVIGQYQRLWCGAQ
AAYVPDINDVPQAILEVEPDFFGSVPRLYEKLHAAVMAQREAMSPGRRRLLAWALRAGFR
HARHEGNGIGGLKLLLARRLVLDKLRQRLFGSRIRVLVSGGAPLDAGLVEFFSALGLPLC
EGWGMSESTAFLTSNEAGTRKAGAVGRALSGVELRIDEDGEVLVRGPLVFKGYFRQPERT
AETFTTDGWLRTGDLGRLDDEGYLWLTGRKKELIITAGGKNIAPSPIEARLKQHPLVEQA
LVHGDRRKHLSALLALDPQRLEAWAQNRRLPGKVDDWPGSPTLMTELQAHVDSVNADLSQ
VERIKAWTLLPRLLSQEKDELTPTQKLKRPVVERNFAALLDSLYD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacagcaaccgccagccgatctgcccagcatccctgccctgctcgcctggcgg
attactcacacgccggactggcccgccgcccaggtgcgtgacaccgacagctggcgaacc
ctggactggggcgaggtcgcccgccgcagtgagacgttggcccaggccctgatcgcagcc
ggggtgcagcccggcgaccgggtggcgatctggagtcggacccgcctggaatggagcctg
ctggatttcgccgtgctctgtgtcggcgccgtcagcgtggggctctacccgagcctgagc
ccggcccaggccatccagcaactgcagcgcgccgactgccgcctgttgttcgtcgagcac
tccgcctgggccctggcgctggatatacagggcctgcgggtcatctgcctcgacccgccc
gcagcgggcagcggccaccaggggctcgacgccttcctcgtccaggccggggacatcccg
acccagcaggtcaggcaacgctggcaggcgctggaccgcgatgccctggccaacctggtc
ttcacctcggggaccaccggcgagccgaaggcggcgatgctcagccacggcaacctgctc
gcctccatcagcgcctataccctgccgatgccacgctacaggagcctggcgtttctgccg
atggcccacgtcggcgaacgggtgatcggccagtaccagcgcctgtggtgcggtgcccag
gccgcctatgtgccggacatcaacgacgtgccccaggcgatcctcgaagtggagccggac
ttcttcggcagcgtgccacgcctgtacgagaaattgcatgcggcggtcatggcccagcgc
gaagcgatgtcgcccggcaggcggcggctgctggcctgggcattgcgcgccggtttccgc
cacgcccgccacgaaggcaacggcattggcggcctgaaactgctgctggcccggcgactg
gtgctggacaagctgcgccagcgcctgttcggctcgcgcatccgcgtgctggtgagcggc
ggcgctcccctggacgcgggcctggtggagttcttctccgccctgggtctgccgctgtgc
gaaggctggggcatgtccgaatccaccgccttcctcacctccaacgaggctggcacgcgc
aaggccggtgcggttggccgcgccctgtccggcgtcgagttgcgcatcgacgaggacggc
gaagtgttggtgcgtggtccgctggtgttcaagggttacttccggcagccggagaggacc
gccgaaaccttcaccaccgacggctggctgcgcaccggcgacctcggccggctcgacgac
gagggctacctctggctaaccgggcgcaagaaggagctgatcatcaccgccggcggcaag
aacatcgcaccatcgcccatcgaggcgcgcctcaagcagcacccgctggtggaacaggcc
ctggtgcatggcgaccggcgcaagcatctcagcgccctgctcgccctggatccgcagcgc
ctggaggcctgggcgcagaaccggcgattgcccggcaaggtggatgactggccaggctcc
cccactctgatgacggagttgcaggcccatgtcgacagcgtgaacgccgatctgtcacag
gtcgagcggatcaaggcctggacgctgcttccgcgcctgctcagccaggaaaaggacgaa
ctcacgccgacgcagaagctcaagcgtccagtggtggagcgcaacttcgcggccttgctg
gatagcctgtacgactag
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