Pseudomonas sp. TCU-HL1: THL1_465
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Entry
THL1_465 CDS
T05373
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THL1_465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pset02000
]
THL1_465
Transporters [BR:
pset02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
THL1_465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Exotox-A_bind
DUF4806
Motif
Other DBs
NCBI-ProteinID:
AOE83013
LinkDB
All DBs
Position
complement(518272..519324)
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AA seq
350 aa
AA seq
DB search
MKLKALRHGVAGLTLSCFAAAFAQADEPKELFFYNWTDYYPVELLAKFEKETGIKVTMDG
YDSNETLLAKLQAGGAAYDVIVPSHSIMRTLIEQGYLQEIDTPSLPNFAHVKPAFRNPDF
DPGRKYSAPYLWGTTGFSYDSARVTGGKLDDSWKEFFEPRPELQGQLAALDTPSSVINAA
SHYLGVDECSENPQDAKRILELLQKQKPFLKMYSSDNTVDRMASGEVIMMQNWNGSTARA
TLQKSSIKYVYPREGVAMFQDNFAVPKSAPHPGNAKVFIDWMMKPENAAAVSNAIAYANG
IDSDALLDKKWKVMDAINMPDEYAERLRPEKECSNQARELQDRIWSKLKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaagcattgcgtcatggggtagccggtctgaccctgagctgtttcgccgcc
gcctttgcccaggcggacgagcccaaggaactgttcttctacaactggaccgactactac
ccggtggaactgctcgccaagttcgagaaggaaaccggcatcaaggtcaccatggacggc
tacgacagcaacgagaccctgctggccaagctgcaggccggcggcgcggcctacgacgtg
atcgtgccgtcgcactcgatcatgcgcaccctgatcgaacagggctacctgcaggaaatc
gacacgccgagcctgccgaacttcgcccacgtgaaaccggccttccgcaaccccgacttc
gaccccggccgcaagtactcggcgccctacctctggggcaccacgggcttctcctatgac
agcgcgcgggtgacgggcggcaagctggacgactcctggaaggaattcttcgaaccgcgt
cccgaactgcagggccagctcgctgcgctggatacgccgagcagcgtgatcaacgccgcc
agccactacctgggtgtggacgaatgcagcgaaaacccgcaggacgccaagcgcatcctc
gaactgctgcagaagcagaagcccttcctgaagatgtacagctctgacaacaccgtggac
cgcatggcttcgggcgaggtcatcatgatgcagaactggaacggctccaccgcccgcgcc
acgctgcaaaagagcagcatcaagtacgtctacccgcgcgaaggcgtggccatgttccag
gacaacttcgccgtgccgaaaagcgcgccgcacccgggcaacgccaaggtcttcatcgac
tggatgatgaagcccgagaacgccgccgctgtgtccaacgccatcgcctacgccaacggc
atcgacagcgatgcgctgctggacaagaagtggaaggtgatggacgccatcaacatgccg
gacgagtacgccgagcgcctgcgccccgagaaggaatgcagcaaccaggcccgcgagctg
caagaccgcatctggtccaagctcaagggctga
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