Pseudomonas sp. TCU-HL1: THL1_4708
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Entry
THL1_4708 CDS
T05373
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_4708
03036 Chromosome and associated proteins [BR:
pset03036
]
THL1_4708
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THL1_4708
Chromosome and associated proteins [BR:
pset03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
THL1_4708
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
MarR_2
P22_Cro
HTH_24
Sigma70_r4
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOE87256
UniProt:
A0A1B3ECI4
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Position
complement(5080690..5081586)
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AA seq
298 aa
AA seq
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MFDYKLLAALAAVVEQGGFERAAQLLGLSQSAVSQRIKLLEARVGQPVLIRAAPPAPTEV
GTRLLNHVQQVRLLERDLQRQVPALEEGGMPERLRIALNADSLATWWAAAVGDFCAEQRV
LTDLVVEDQEVGLKRMRAGEVAACVCAAERPVAGARSLLLGAMRYRALASPAFIERHFPK
GVTPTALARSPAIVFGPDDLLQHRYLQALGVDGGFIHHLCPSSEGFVRLTEGGLGWGLVP
EQQVVIQMARGELQELIPDHPIDVPLYWHHWRHGGELLSLLTDHLARAASRWLVPLAR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgactacaagttactggcggccctggcggccgtggtggagcagggtgggttcgag
cgcgcggcccagttgctgggcttgtcgcagtcggctgtgtcacagcggatcaagctgctg
gaggccagggtcggccagccggtactgatacgcgccgcgccgcctgcaccgaccgaggtg
ggtacacgcctgctcaaccatgtgcagcaggtgcgcctgctggaacgggatctgcaacgc
caggtgccggcgctggaggaaggcggtatgccggagcgccttcgcattgctctcaatgcc
gacagcctggcgacctggtgggcggcagcggtcggggacttctgcgccgaacagcgggtg
ctgacggatctggtggtagaggatcaggaggtgggcctgaaacgcatgcgcgccggtgaa
gtggccgcctgtgtctgcgctgccgagcggccggtggcgggggcccgcagcctgctgttg
ggtgccatgcgttaccgcgccctggccagcccggccttcatcgaacggcattttcccaag
ggggtgacgccgacggcgctggcgcgttcaccggccatcgtgttcggaccggatgacctg
ttgcagcatcgctacctgcaggctctcggtgtcgacggcggcttcatccaccacctgtgc
ccctcatccgaaggcttcgtacgcctgaccgaaggggggctgggctgggggctggtgccg
gagcagcaggtcgtcattcagatggcgcggggtgaactgcaggaactgattcccgaccac
cccatcgacgtgccgctctactggcaccattggcgccatggcggcgagctgctcagtctg
ctcaccgaccacctggccagggccgccagccgctggctggttcccctggcacgttga
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