Pseudomonas sp. TCU-HL1: THL1_4712
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Entry
THL1_4712 CDS
T05373
Name
(GenBank) diguanylate cyclase
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
THL1_4712
Enzymes [BR:
pset01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
THL1_4712
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
AOE87260
UniProt:
A0A1B3ECJ6
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All DBs
Position
5083681..5085843
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AA seq
720 aa
AA seq
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MAFAYWPFDGQCLFANTHIRLDTWRHRTRNLHLKLDIKHSLSLKLLRVVLLSALVVGVVL
SCAQIVFDAYKTRQAVSNDANRILGMFRDPSTQAVYSLDREMGMQVIEGLFQHESVRQAS
IGHPNEPMLAEKDRPLMELSTRWLTDPILGKEQTFTTQLVGRSPYSEYYGDLSITLDTAP
YGEDFVTSSVIIFISGVLRALAMGLVLYLVYHWLLTKPLSKIIEHLTSINPDRPSEHKLP
MLKGNERNELGLWINTANDLLASIERNTHLRREAENSLLRMAQYDFLTGLPNRQQLQQQL
DQILEDAGRLQRRVAVLCVGLDDFKGVNEQFSYQTGDQLLIALADRLRGHSGRLGALARL
GGDQFALVQADIEQPYEAAELAQSVLDDLEVAFSLEQQEVRLRATIGITLFPEDGDSTEK
LLQKAEQTMTLAKSRSRNRYQFYIASVDSEMRRRRELEKDLREALNRGEMHLVYQPQVDY
RDHRVVGVEALLRWQHPQHGFVPPDLFIPLAEQNGCIIPIGEWVLDQACRQLREWHDQGF
SELRMAINLSTVQLHHAELPRVVNNLLQVYRLPQRSLEMEVTETGLMEDISTAAQHLLSL
RRSGALIAIDDFGTGYSSLSYLKSLPLDKIKIDKSFVQDVLEDEDDATIVRAIIQLARSL
GMQVIAEGVETAEQEAYIIAQGCNEGQGYLYSKPLPAREITLYLKQARRLTNAASNPATL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtggcattcgcatactggccctttgacggccagtgcctgtttgccaatactcacatccgt
ctggacacctggcggcatcgaacaaggaatctccatttgaagctggatatcaaacacagc
ttgtcgctgaagctgctgcgcgtggtgttgctctctgcactggtagtcggtgtggtgctc
agttgtgcgcagatcgtgttcgacgcatacaagacgcggcaggccgtgtccaacgatgcc
aaccggattctcgggatgttccgcgacccctccacgcaggccgtctacagcctggatcgc
gagatgggcatgcaggtgatcgaaggcctgttccagcacgaatcggtacgccaagcctcc
atcggccatcccaacgagcccatgctggcggaaaaggaccggccgctgatggagctgtcc
acccgctggctgaccgaccccatcctcggcaaggaacagaccttcaccacccaactcgtc
ggccgcagcccctacagcgagtactacggcgacctcagcatcaccctcgacaccgccccc
tacggcgaagacttcgtcaccagctcggtcatcatcttcatctctggcgtgctgcgcgcg
ttggccatgggcctggtgctctacctcgtctaccactggctgctgaccaagcccctgtcg
aagatcatcgagcacctgaccagcatcaatcccgaccgccccagcgaacacaagctgccc
atgctcaagggcaacgaacgcaacgagctgggcctgtggataaacaccgccaacgacctg
ctggcctccatcgaacgcaatacccacctgcgccgcgaagccgagaacagcttgctgcgc
atggcccagtatgacttcctcaccggcctgcccaatcgccagcaactgcaacagcaactc
gaccagatcctcgaagacgccggccgcctgcagcgccgcgtcgcggtgctctgcgtgggc
ctggacgatttcaagggcgtcaacgaacagttcagctaccagaccggcgaccagttgctg
atcgccctggccgaccgcctgcgtggccacagcggccggctcggcgccctggcgcgcctg
gggggcgaccagttcgccctggtccaggccgatatcgagcagccctacgaggccgccgaa
ctggcccagagcgtgctggacgacctggaagtcgcgttctccctggagcagcaggaggtg
cgcctgcgcgccaccatcggcatcaccctcttcccggaggacggtgacagcaccgagaag
ctgctgcagaaagccgaacagaccatgaccctggccaagagccgctcgcgcaatcgctac
cagttctacatcgccagcgtcgacagtgaaatgcgccgccgccgcgaactggaaaaggac
ctgcgcgaagccctcaaccgcggcgagatgcaccttgtctaccaaccccaggtggattac
cgcgatcatcgcgtcgtgggtgtcgaagccctgctgcgctggcagcatccgcaacacggc
ttcgtgccgccggacctgttcatcccactggctgaacagaacggctgcatcatccccata
ggcgaatgggtgctggaccaggcctgccggcagctacgcgaatggcacgaccagggcttc
tccgaactgcgcatggccatcaacctgtccaccgtacagctgcaccatgccgagctgccg
cgggtggtgaacaacctgctgcaggtctaccgcctgccccagcgcagcctggaaatggaa
gtcaccgaaaccggtctgatggaagacatctccaccgccgcccagcacctgctgagcctg
cgccgctccggcgcgctgatcgcaatcgacgacttcggtacgggctactcctcgctgagc
tacctgaagagcctgccgctggacaagatcaagatcgacaagagcttcgtccaggacgta
ctggaagacgaagacgacgccaccatcgtgcgcgccatcatccagctggcacgcagcctg
ggcatgcaggtgatcgccgaaggcgtggaaaccgccgagcaggaggcctacatcatcgcc
cagggctgcaacgaaggtcagggctacctctacagcaagcccctgcctgcacgcgaaatc
acgctctacctcaagcaggccaggcgactgaccaacgcggcgtccaacccggcgacgctc
tag
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