Pseudomonas sp. TCU-HL1: THL1_502
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Entry
THL1_502 CDS
T05373
Name
(GenBank) diguanylate cyclase
Organism
pset
Pseudomonas sp. TCU-HL1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
SBP_bac_3
PAS
PAS_3
PAS_8
PAS_4
PAS_7
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AOE83050
UniProt:
A0A1B3E0H9
LinkDB
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Position
complement(555915..559652)
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AA seq
1245 aa
AA seq
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MARARALLMLWLALWTFPAGALKLTQEEQDWLDHRGELRLGIDASWPPFEFRDAQGNHQG
LAADYIGLVRQRLDIQLAPVEPSSWSEVLQQARNGDLDLLPGIMSTPERQQYLLFTRPYL
DFPIVILSQTRGPQPSNIEDLYGLRVGVVADYAPHELLRNQHPDLSLQIHPSVAASLQAL
ATGQVDAFVGDLASSVWSLRQLKLEGISISGETPYRYQLAMATPKNHPILAGILDKVFAE
ITPEEAAAIQERWVGGALYQGTDWSRVLLYGLPGLLVIAGVLTFVLRVNRRLSNEMTSRA
ALQEELRSSEQHYRGLVESLNAIAWEMRVEDYCYTYVSPHAERLLGYPLSTWREPGFWHR
TLHPDDTAWANVFCEAETSAGRDHSLDYRMIAADGRVLWVRDIITLIPHGETQMMRGLMI
DITEAKQTEQALRLSEQKFASVFHNCPDIIVIARRTDGSLLAINHTFEQQIGLKASEALG
RTATELDIWGIPGIGPKLLQRLQQGNPLHNLEMPFRRANGEHFTGLISAQTIDLDDTPAL
VVVVRDITQLKETQQLLQVSEEKFARAFHASPDGLLITRISDGLLLEANEGFSRITGYKQ
QEIAERSTLDLGLWANPADRQHMIQLIREQGSLRHFTAAIRTKTGQMRHCELSAQPIPIG
GEPCMLTIARDVTERQQMQEKLLQAATVFESTAEGVLITDTDLRITAVNRAFSEITGYSE
DEALGQSPRLLASGQHDSAFYAAMWHQLEQEGHWQGEIWNRRKNGEPYPEWLTISAVRDR
HQQVTHYVGVFADISPLKHAQARLDYQAHHDPLTGLPNRLLFESRLQLALADATGDDHHG
AVLFIDLDRFKHINDSLGHPVGDLLLKGIAGRLREQLRDIDTVARLGGDEFIILLPGLHN
ANDAKTVANKLLACFEAPVPAGQHEFFMSASIGISLFPEHGLDVATLVKNADAAMYRAKA
RGRNRIEFYTRDLTSQATERMALETELRRALERNELSLSYQPKFSLQHHNLVGAEALVRW
YHPRLGEIPPERFIPLAEESGLILPLGDWVLEHACRQMQQWQEGHAPFGPLSINLAGAQL
RQPLLVERLQLLIQTLGLEPQRLQLEITESFIMSQAEEALCVLHNLKSLGVQLAIDDFGT
GYSSLSYLKRLPLDVLKIDKSFVRGLPDDPNDAAISRAIIALGRSMQLTVIAEGVETKAQ
EYFLAAEGCEQIQGFIVSAALPAETFARTFLSPLPAVGAQQRAPV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcgcgggccctactgatgctctggctggcgctctggaccttcccggccggc
gccctgaagctcacccaggaagaacaggactggctcgaccatcgcggcgagctgcgactg
ggcatcgacgcctcctggcctccctttgagttccgggacgcccagggcaaccaccagggc
cttgccgccgactacatcgggctggtccgccagcgtctggacatccaactcgcgcccgta
gaacccagtagctggagcgaagtgctgcaacaggcccgcaacggcgacctggacctgctg
cccggcatcatgtccacccccgagcgccagcaatacctgctcttcactcgcccttacctc
gacttccccatcgtcatcctgtcccagacccgtggcccgcagccgtccaatatcgaggac
ctctacggcctgcgcgtcggcgtcgtggccgactacgcgccgcacgaactgctgcgcaac
cagcaccccgacttgagcctgcagatccacccctccgtggccgcctccctccaggcactt
gccaccggccaggtggacgccttcgtcggtgacctcgcctccagtgtctggagcctgcgc
cagctaaagctcgaaggcatcagcatcagcggcgagacgccctaccgctatcaactggcc
atggcgacgccgaaaaaccacccgatcctggccggcatcctcgacaaggtcttcgccgaa
attaccccggaagaagccgccgccatccaggagcgctgggtagggggcgccctctatcaa
ggaaccgactggagccgcgtcctgctctacggcttgcccggcctgctagtgatcgccggc
gtgctcaccttcgtcctgcgcgtcaaccgccgactgagcaacgaaatgaccagccgcgcc
gccctccaggaggaactgcgcagcagcgaacagcactatcgcggcctggtggaaagcctc
aacgccatcgcctgggaaatgcgcgtcgaagactattgctacacctacgtctccccccat
gccgaacgtctgctcggctatcccctgagcacctggcgggaacccggcttctggcaccgc
accctgcaccccgacgacaccgcctgggccaacgtcttctgcgaagcggaaacctccgcc
ggccgcgaccacagcctcgactaccgcatgatcgccgctgacggccgcgtgctctgggta
cgggacatcatcaccctcataccccacggcgagacccagatgatgcgcggcctgatgatc
gacatcaccgaggccaagcagaccgaacaagccctgcgcctgtccgaacagaagttcgcc
tcggtcttccacaactgccccgacatcatcgtcatcgcccgccgcaccgacggcagcttg
ctggcgatcaaccataccttcgagcaacagatcggcctcaaggccagcgaagccctcggc
cgcaccgccaccgagctcgacatctggggcattcccggcatcggcccgaagcttctccag
cgcctgcaacagggcaatccactgcacaacctggaaatgcccttccgccgcgccaacggc
gaacacttcaccggcctgatctccgcccagaccattgacctggacgacactccggcgctg
gtcgtcgtcgtccgcgacatcacccaactcaaggaaacccagcaactcctgcaggtttca
gaagaaaaattcgcccgtgccttccacgcctcgccagacggcctgctcatcacccggatc
agcgatggcctgctgctagaagccaatgaagggttcagccgcatcactggctacaagcaa
caggaaattgccgaacgctccaccctggacctcggcctctgggccaacccggccgaccgt
cagcacatgatccaactcatccgcgagcaaggcagcctgcgccacttcaccgcggccatc
cgcaccaaaactggacaaatgcgccactgcgagctatccgcccagcccatccccatcggc
ggcgagccctgcatgctgaccatcgcccgcgacgtcactgagcggcagcaaatgcaggag
aagctactgcaagccgccaccgtcttcgaaagtacggccgaaggcgtgctgatcaccgac
accgacctgcgcatcacggccgtcaaccgcgccttcagcgaaatcaccggctacagcgag
gacgaggccctcggccagtcgccccgcctgctcgcctccggccagcacgacagcgccttc
tacgccgccatgtggcaccaactggagcaagaagggcactggcaaggtgaaatctggaac
cgtcgcaaaaacggcgagccctaccccgaatggctcaccatcagtgccgtgcgcgaccgc
caccagcaggtcacccactacgttggcgtgttcgccgacatctcgccgctcaagcacgcc
caggcacgcctcgactaccaagcccaccacgacccgctcacaggtctgcccaaccgcctg
ctgttcgaaagccgcctgcaactggccctggccgatgccacgggtgacgaccaccatggc
gcagtgctgttcattgacctggaccgcttcaagcacatcaacgacagcctcggccacccg
gtgggcgacctgctgctcaaaggcatcgccggccgtctgcgcgaacaactgcgcgacatc
gacaccgtggcccgcctgggcggcgacgaattcatcatcctgctgccgggcctgcacaac
gccaatgacgccaagacagtggccaacaagctgctggcctgctttgaagcgcccgttccc
gccgggcaacacgagttcttcatgagcgcgagcatcggtatcagcctgttcccggaacac
ggcctggacgtcgccaccctggtgaagaacgccgacgccgccatgtaccgggccaaggcc
cgcggccgcaaccgcatcgagttctacacccgcgacctgaccagccaggctaccgagcgc
atggccctggaaaccgaactgcgccgcgccctggagcgcaacgaactgtccctcagctac
caacccaagttcagcctgcagcaccacaacctggtgggcgccgaagccctggtacgctgg
tatcacccgaggctgggcgaaatcccgccggagcgcttcatccccctggccgaagaatcc
ggcctgatcctgccgctgggcgactgggtgctggagcatgcctgccggcagatgcagcag
tggcaagaaggccatgccccctttggccccctttccataaaccttgccggcgcccaactg
cgtcagccgctgctggtggagcgcctgcagttgctcatccagaccctgggcttggaaccc
caacgcctgcaactcgaaatcaccgaaagcttcatcatgagccaggccgaagaagccctc
tgcgtgctgcacaacctcaagtccctcggcgtgcagctggccatcgacgactttggtacc
ggctactcctccctgagctacctcaagcggctgccgctggatgtcctgaagatcgacaag
tccttcgtccgtggcctgcccgacgatcccaacgacgccgccatcagccgcgccatcatc
gccctcggccgtagcatgcaactcaccgtgatcgccgaaggcgtcgaaaccaaggcccag
gagtacttcctcgccgccgaaggatgcgaacagattcaaggctttatcgtcagcgcagcc
ctgccggccgagaccttcgcacgaactttcctcagtcccctccctgcggttggcgcccag
caaagggcgcctgtataa
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