Pseudomonas sp. TCU-HL1: THL1_5115
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Entry
THL1_5115 CDS
T05373
Name
(GenBank) outer membrane adhesin-like protein
KO
K20276
large repetitive protein
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THL1_5115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Cadherin_4
Big_9
HemolysinCabind
GldM_3rd
Motif
Other DBs
NCBI-ProteinID:
AOE87663
UniProt:
A0A1B3EDU8
LinkDB
All DBs
Position
5524370..5528887
Genome browser
AA seq
1505 aa
AA seq
DB search
MAISTVAFSNTPQANGDSFLYENLVRDGLDYICLDVMANDLGGKAKTLYSLDDGVTADGS
AATRTQIQADLLAHDQNCYSAYGAHIWIGQDTLDGKVKVLYDASALLQSEEYRSLSVGEY
LTDSFTYAIRLGNGTLSWATATVRIAGVNDAPVVSGPVTLSAIAEDSGARLITQAELLAH
ASDIDGDGLTASDLQISSGNGSLVDNGNGTWTYTPALNDDTQASFTYSISDGSLSVAGSA
SLDITPVNDAPTTSAVTLAAIAEDSGARLITQTQLLANAADVDGPALTATNLQISAGSGS
LVNNGNGTWTYTPALNDDTQVSFTYTVSDGSLTASGSATLDITPVNDAPTTTPVTLTAIA
EDSGARTITQAEFLANATDIEGDELTVSDLTISSGGGTLTDNGDGTWSYSPDENDDTAVS
FSYSISDGDLTVAGSASLDITPVNDAPTTSEVTLDAIAEDSGIRLITQAELLANADDIEG
DTLTASGLTISSGGGTLTDNGDGTWSYSPDENDDTAVSFSYTISDGDLTVAGSASLDITP
VNDAPTTSEVTLNAIAEDSGIRLITQAELLANADDIEGDTLAASGLTISSGGGTLTDNGD
GTWSYSPNENDDTAVSFSYTISDGDLTVAGSASLDITPVNDAPTTSEVTLDAIAEDSGAR
LITQTELLANATDVDGPTLTATNLQISAGSGSLLDNSDGTWSYTPALNDDTAVSFSYSVT
DGLLSADGSASLEITPVNDAPTTAPVTLASIAEDSGARLITQAQLLGNAADVDGPALTAT
NLQISAGSGTLIDNGNGTWSYTPALNDDTAVSFTYFVTDGSLSAAGSATLDITPVNDAPT
TTPVTLTAIAEDSGARLITQAQLLANAADVDGPALTATNLQISAGSGSLVDNGNGTWSYT
PALNDDTSVSFSYSVTDGSLSAAGSASLDITPVNDAPVNTLPGPQSTPAGAPKGISGLSI
ADVDAASSNLTVTFQVAHGSLSAQSFLGGASVTGLNTSTLTLNGTLAQINATLAANISYL
SAANFSGEDTLTMTTSDGAASDVDNLGITVTATQVNAAPVATNDVLYVSNNTAAFNPANG
TGIVFSVAALLGNDFDVDGSFLSLIGLGQGTGAISDVKFIEGSNNSLITFVSGNNPAAPF
GAFTYTLSDNAGGTTTGSVTVNLVSTNGASSINLSGNSYQAAFLDGGSNVDALTGAAASD
LFVGGNGADTLIGGSGEDRLRGGEDNDTLDGGDGIDMLDFSDATGSVTFTLNQGSNPAAG
TNGFWSTGALAGIGTDAYKNMEGVIGSRNNDNLTGSSGNDILRGGSGNDVLDGGAGSDLL
DLSDATAALNFTLVQSNSNTVVDLSTVGLGSDTYKNMEGLIGSAFNDSLTGSGGADELRG
GAGNDTLNGGTGIDVLYGGLGADVLIGGGGADLFRYNNLSEAEDRIADYSAAQGDKLDFS
VLLGTSLLPQAIANYVKAVQVGSDISVQVDVDGNGAGATFVEIVTITGVQQVTATFGGGD
HIIPS
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggccatctccaccgtcgcattcagcaataccccccaggcgaacggcgacagctttctc
tatgagaatctggtgcgggacggcctcgactacatctgcctggatgtcatggcgaacgac
ctaggtggaaaggccaaaaccctctactcgctggacgatggcgttacggccgatggcagc
gcggcgacccggacgcagatacaagcggacctgctggcccatgaccagaattgctacagc
gcctacggcgcccacatctggatcggccaggacacgctggatgggaaggtcaaggtcctc
tacgacgccagcgcgctcctccagagcgaggaataccggagtctgtctgtcggcgagtac
ctgaccgacagcttcacctacgccatacgcctgggcaatggcaccctgagctgggcaacg
gcgacggtgcggatcgccggcgtcaacgacgcaccggtggtcagcggcccggtaaccctg
tctgccatcgccgaggacagtggtgcgcgcctcatcacccaggccgaactgctggcccat
gcctcggacatcgacggtgatggactcaccgccagcgacctgcagatcagttcaggcaat
ggcagcctggtcgacaacggtaatggcacctggacttacacccccgctctgaacgacgac
actcaggcgtccttcacctacagcatcagcgatggctcgctgagcgttgccggtagcgca
agcctcgatatcacgccggtcaacgatgcgccgacgaccagcgccgtgacgctggccgcc
attgccgaagacagcggcgcccgcctgatcacccagacccagttgctggccaatgcggca
gatgtcgacggtcctgccctgaccgctaccaatctgcagatcagcgcaggcagcggctcc
ctggtcaataacggcaacggcacctggacgtacaccccggcgctgaacgacgacacccag
gtgtccttcacctacaccgtcagcgatggttcgctcacggcgtccggcagcgccacgctg
gatatcactccggtcaacgacgcccccaccaccactccggtaaccctgaccgccatcgcc
gaagacagcggtgcccgcaccattactcaggccgaatttctcgccaatgccaccgacatc
gagggcgacgaactcactgtcagcgacctgacgatcagcagcggcggaggcaccctgacc
gacaacggcgatggcacctggagctattccccggacgaaaacgacgacacggcggtgagc
ttcagctactcgatcagcgacggcgacctcactgtcgccggcagcgccagcctcgatatc
accccggtcaacgatgcgccgacaactagcgaagtgacgctggacgccatcgccgaagac
agcggcatccgcctgattacccaagccgagctgctggccaatgccgatgacatcgaaggc
gacacgctcaccgccagcgggctgacgatcagcagtggtggcggcaccctgaccgataac
ggcgatggcacctggagctatagcccggacgaaaacgacgacacggcggtgagcttcagc
tacacgatcagcgacggcgacctcaccgtcgccggcagcgccagcctcgatatcaccccg
gtcaacgatgcgccgacaactagcgaagtgacgttgaacgctatcgccgaagacagcggc
atccgcctgattacccaagccgagctgctggccaatgccgatgacatcgaaggcgacacg
ctcgccgccagcgggctgacgatcagcagtggtggcggcaccctgaccgataacggcgat
ggcacctggagctattccccgaacgaaaacgacgacacggcggtgagcttcagctacacg
atcagcgacggcgacctcaccgtcgccggcagcgccagcctcgacatcactccggtcaac
gatgcgccgacaactagcgaagtgacgctggacgccatcgccgaagacagcggcgcccgc
ctgattacccagaccgagttgcttgccaatgcaacggatgtcgacggcccaactttgact
gcgaccaatctgcagatcagcgccggcagcggtagcctgctcgacaatagcgacggcacc
tggagctatacaccggccctcaatgacgacaccgcagtgagcttcagctactcggtgacc
gacggcctgctcagcgccgatggcagcgccagcctggagatcaccccagtcaacgacgcc
cccaccaccgccccggtaaccctcgcctccatcgccgaggacagcggagcccgcctgatc
acccaggcccagttgctgggcaatgcagcagacgtcgacggccctgccctgaccgctacc
aaccttcagatcagcgccggcagcggcacattgatcgacaacggcaatggcacctggagc
tataccccggcgctcaacgacgacacggcggtgagctttacctacttcgtaactgacggc
tcactcagcgctgccggtagtgccacgctggatatcaccccggtcaacgacgccccgacc
accactccggtaaccctgactgcgattgccgaagacagcggtgcgcgcctcatcacccag
gcgcaattgctggccaacgcagcggatgtcgacggccctgccctgaccgctaccaatctg
cagatcagcgccggcagcggttccttggtcgacaatggcaacggcacctggagctatacg
ccggcactgaacgacgacacgtccgtcagcttcagctactcggtcacggacggctcgctc
agtgctgccggcagcgccagtctcgacatcaccccggtcaacgatgcacctgtgaacacc
ctgcccggcccacaatccactcccgccggagcccccaagggcatcagtggccttagcatt
gccgacgtggacgccgcctcgagcaacctgaccgtgacgttccaggtcgcccacggcagc
ctgtccgcccagtccttcttaggcggcgcctcggttactggccttaacacctcgacactc
acgctcaacggaacgctcgcccagatcaacgcgacgctggccgcgaatatcagctacctc
tccgccgccaacttcagcggcgaagacacgctgaccatgacaaccagcgatggcgctgcc
agcgatgtcgacaacctgggcatcacggtcacggccacgcaggtgaacgccgcgccggtt
gcgaccaacgatgtgctctacgtatccaacaacaccgcagccttcaatccggccaatgga
actggcatcgtcttttcggtcgccgccttgctgggcaacgactttgatgtcgatgggtcg
ttcctgtccctcatcggtctcggccagggaacaggcgcgatttccgatgtgaagttcatc
gaaggctcgaacaacagcctgattaccttcgtcagcggcaacaacccggccgcccccttt
ggtgcgttcacctacaccctttcggacaatgccggcggaacgaccaccggatcggtaacg
gtaaatctcgtctccaccaacggcgcgtcgagcatcaacctgtccggcaacagttaccag
gcagcctttctcgacggcggcagcaacgtggacgccctgaccggagcggccgcgagtgat
ctgttcgtcggcgggaatggtgccgacactctcatcggcggtagtggcgaagatcgcctg
cgcgggggcgaagacaacgacacgctggatggcggtgacggcatcgatatgctcgatttc
tccgatgccaccggttcagtcactttcaccctcaatcagggcagcaacccggctgctggc
accaacggtttctggagcacgggagccctggccggaatcggcacagacgcctacaagaac
atggaaggcgtgatcggttcgcgcaacaacgacaacctgaccggcagcagcggcaacgac
attctccggggcggtagcggaaacgatgtcctggatggcggtgccggcagcgacctgctc
gatctgtcagacgccactgcagcgctcaacttcacgctggtgcagagcaacagcaacacc
gtcgtcgatttgtctactgttggcctggggtccgacacctacaagaacatggaagggctg
attggttcggcattcaatgacagcctgaccggcagcggcggtgccgacgaactgcgcggc
ggagccggcaacgacacgctcaatggcggaaccggcattgatgtgctgtacggaggcctg
ggggcggatgtgctgattggtggcggcggcgctgacctgttcaggtacaacaatctcagc
gaggccgaggaccgcatcgccgactacagcgcggcccagggcgacaagctcgatttctcg
gtgctgctcggcaccagcttgctgccgcaagcgatcgccaactacgtcaaggcggtgcag
gtaggcagcgacatctccgtacaggtggatgtcgatggcaatggcgccggggcaacgttc
gttgagatcgtcaccattaccggagtccagcaggtaacggcgaccttcgggggtggcgac
cacatcattccgagctga
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