Pseudomonas sp. TCU-HL1: THL1_5178
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Entry
THL1_5178 CDS
T05373
Name
(GenBank) amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset02010
ABC transporters
pset02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THL1_5178
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THL1_5178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pset02000
]
THL1_5178
Transporters [BR:
pset02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
THL1_5178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AOE87726
LinkDB
All DBs
Position
complement(5597186..5598307)
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AA seq
373 aa
AA seq
DB search
MSQKIFRKGFLALAVTTAMGISSVVQADVVIGVAGPHTGANASFGEQYWRGASQAAEDIN
AAGGVNGEKIKLVKADDACEPKQAVSVANRLVDQDKAIAVVGHFCSSSTIPASEVYDEAG
IIAMTPGSTNPAVTERGLSGMFRMCGRDDQQGIVAGDYIVDKLKATKVAIIHDKDTYGQG
LADATKAQLAKRGVKEVLYEGLTRGEKDFNALVTKIRATGAEVVYFGGLHPEAGPLVRQM
REQGLTAVFLSGDGIVTDELVTTAGGPQYTKGVQMTFGADPRKIADGQAVIEKFRAGGFE
PEGYTLYAYATLQALAAGFNGAGANDPAKASEWLKGHPVQTVMGKKEWDSKGDLKVSDYV
IYEWDDKGKYHQQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaagattttcagaaaaggctttctggctctggcggttaccaccgcgatgggc
atttcttccgttgtacaggctgatgtagtcatcggcgttgccggtccgcacaccggcgcc
aacgcatcctttggcgaacaatattggcgcggcgcttcgcaggccgccgaagacatcaac
gccgctggcggcgtcaacggcgagaagatcaagctggtcaaggccgacgatgcctgcgag
ccgaaacaggccgtgtccgtcgccaaccgcctggtcgatcaggacaaggccatcgctgtg
gtcggccacttctgctcttcctccaccatccccgcttccgaggtctacgacgaggccggg
atcatcgccatgacccccggttccaccaaccctgccgtcactgaacgcggcctgtccggc
atgttccgcatgtgcggtcgggacgaccagcagggcatcgtcgccggcgactacatcgtc
gacaagctcaaggccaccaaggtcgccatcatccacgacaaggacacctacggtcagggc
ctggccgatgccaccaaggcgcagctggccaagcgtggtgtgaaggaagtcctgtacgag
ggcctgacccgtggtgagaaagacttcaacgccctggtcaccaagatccgcgccacgggc
gccgaggtcgtctacttcggcggcctgcaccctgaagccggcccgctggttcgccagatg
cgcgagcagggcctgaccgcggtcttcctctccggcgacggcatcgtcaccgacgaactg
gtcaccaccgccggcggcccgcagtacaccaagggtgtgcagatgaccttcggcgccgac
ccgcgcaagatcgccgacggccaggccgtgatcgagaagttccgcgctggcggcttcgag
ccggaaggctacaccctttacgcctacgccaccctgcaggccttggcggccggcttcaac
ggcgctggcgccaacgacccggccaaggcttccgaatggctgaagggccatccggtgcag
accgtgatgggcaagaaggaatgggattccaagggcgacctgaaagtctccgactacgtg
atctacgagtgggatgacaagggcaagtatcaccagcagtaa
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