Pseudomonas sp. TCU-HL1: THL1_5244
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Entry
THL1_5244 CDS
T05373
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00540
Lipopolysaccharide biosynthesis
pset01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
THL1_5244
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pset01005
]
THL1_5244
Enzymes [BR:
pset01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
THL1_5244
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
THL1_5244
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
THL1_5244
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
THL1_5244
Lipopolysaccharide biosynthesis proteins [BR:
pset01005
]
Lipid A
THL1_5244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
DUF2542
Motif
Other DBs
NCBI-ProteinID:
AOE87791
UniProt:
A0A1B3EE15
LinkDB
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Position
complement(5679361..5680632)
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AA seq
423 aa
AA seq
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MNRTLYTLLFHLGLPLVALRLAWRAWRAPAYARRVGERFAFGLPDIRPGGIWVHAVSVGE
SIAAAPMVRALLERHPGLPITITCMTPTGSERIRALFGDRVQHCYLPYDLPWAAARFLGH
VRPKLAVIMETELWPNHIHQCARRGIPVVLANARLSERSARGYARFGKLTAPMLAELSWI
AVQTEAEAERFRRLGAHPECVTVTGSIKYDLRIDPALLQGASELRSQWGAEARPVWIAAS
THAGEDEIILAAHKALLKQRPDALLILVPRHPERFGPVFELCRREGLATVRRSTGEPVSA
SDAVLLGDTMGELLFLYALADIAFVGGSLVANGGHNLLEPAALGKPVLSGAHLFNFLEIA
AQLRDAGALVEVADAHELTTQVGGLWSEPKRSMAMHDAGLDVLKANQGALERLLGGIARL
LQR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaccctctataccttgttgttccatcttggtcttccgctggtggccctgcgc
ctcgcctggcgagcctggcgcgcgccggcctatgcccggcgcgtaggcgaacgcttcgct
ttcggcctgcctgacatccggcccggaggcatctgggtccacgccgtgtcggtaggcgag
agcattgccgccgcgcccatggtccgcgccctgctggagcgtcacccgggcctgccgatc
accatcacctgcatgactcccacaggctcggagcgtatccgtgcgctgttcggcgaccgg
gtgcagcattgctacctgccgtatgacctgccctgggctgcggcgcgctttctgggacac
gtacggccgaagctagcggtgatcatggaaaccgagctctggccgaaccacatccaccag
tgcgcccggcgtggtattccggtggtgctggccaatgcccggctgtccgagcgctcggct
cgtggctatgcgcgcttcggcaagctcacggcgcccatgctggccgaactgagctggatt
gcggtgcagaccgaggccgaagccgagcgcttccgtcgactcggtgcgcaccctgaatgc
gtgacggtaaccgggtcgatcaagtacgacctgcgcatcgacccggccctgctgcagggc
gccagtgagctgcgcagccagtggggcgccgaggcccgaccagtgtggattgccgccagc
acccatgccggggaggacgaaatcatccttgccgcccacaaggccctgctgaagcaacgg
cccgacgcgttgctgatcctggtaccgcgccatccggagcgcttcggtccggtgttcgaa
ctctgccgccgcgaagggctggcgaccgtgcgccgttccacgggtgagccggtgagtgcg
agcgacgcggtgctgttgggcgacaccatgggcgagctgctctttctctatgccctggcc
gatatcgcctttgtcggcggtagcctggtagccaatggcggccacaacctgctggagccg
gcggccctgggcaaaccggtactctcgggggcgcacctgttcaacttcctcgaaatcgcc
gcgcaactgcgcgacgccggcgccttggtcgaggtggccgatgcccatgagttgacgacc
caggtgggggggctctggagcgagccgaagcgttctatggccatgcacgatgccggcctg
gacgtgctcaaggccaaccagggggcgctggagcggttgttgggcgggattgcgcggctg
ctacagcgctga
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