Pseudomonas sp. TCU-HL1: THL1_5438
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Entry
THL1_5438 CDS
T05373
Name
(GenBank) hypothetical protein
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
THL1_5438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
OLD-like_TOPRIM
AAA_21
DUF2813
AAA_23
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AOE87985
LinkDB
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Position
complement(5893965..5895917)
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AA seq
650 aa
AA seq
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MKITKISAVNFRALQNVTLELRDSLSLLIGRNNSGKTSLLVLFEKFYEPGVSFNYHDFPL
AVRKDLAAIDHKTDMLPLSISMRVEIEYDEKDSLRHLSEFMLDLDSEINNVKILFECVVN
KDLLLRDIEQFEGERERFLRKNLDRYLQVNVYAYADEDDLLLENRSKLVKKEIAAVRDLI
NFQIIHAKRDVASSEGGKKMLSKLTTQYFNKANKDVTDFDPINNLLLKIDESLESSYKDF
FEPFLKTSKAFLGIEDIKVVSNLESNEVLENSSQVVYGDRSEFLPETFNGLGHMNILYLL
LSVEIKKESFAKTGKNINLLFIEEPEAHTHPQMQYVFANQIKSILNDIENIQAVITTHSS
HIVSQCDFKDIRYLQNSDGCTRVKNFHSELKAKYGKDEDSFKFLEQYLTLNSCELFFASK
VIFIEGVTERMLWPYFVELFDKSKVQSKEHISLFSQNVTILEVGANAKAFKHFLDFLEIK
TLVITDIDTTKKTIDTKKANPRTIYPSFKVAGADHTSNATLKHYYDAPDFSEEAKFSSWF
EKLVAHELKHSYPKIHIAYQKKEEGYHARSFEDAFVHLNRDVIKKKIDNINGLKNTHEFD
GALDAYDLIETVLDKKSAFASSLLYLALTDDEVTWRIPAYIGEALEWISE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaccaaaatttctgctgttaatttccgagctctccagaatgtgacactagag
ctgcgggacagcctatctctgcttattggcagaaataatagcggcaaaacttcactgctt
gtattgtttgagaagttttatgagcctggggtgtcgttcaattatcatgattttccgtta
gcggtgcgtaaagatttagcggcaattgaccacaaaactgacatgttgccgctatctata
agtatgagggttgagatcgaatatgatgaaaaagacagcttgaggcatctgtcagaattc
atgttggatcttgatagcgagattaacaatgtcaagattctgtttgagtgcgttgtaaat
aaggacttgttgctgagggatattgagcagttcgagggggaacgagaaaggtttttgagg
aaaaacctcgataggtatttgcaggtcaacgtatacgcatatgctgatgaggatgatctg
ttacttgaaaatcgaagtaagttggtaaaaaaggaaatagccgcagttagagatctgatc
aactttcagataattcatgctaagcgagatgttgctagtagcgaaggtggaaagaaaatg
ctttctaagttaactacgcaatatttcaataaggcaaacaaggatgtaacagatttcgat
ccgataaataacttgcttcttaagattgatgagagtcttgaaagtagctacaaggatttt
ttcgagcctttcctgaagacctcaaaggcatttctggggattgaggatattaaggtcgta
tctaatctcgagtccaatgaagtgctagagaatagttcgcaagtagtttatggtgaccgt
tctgagtttctcccggaaacattcaatggtctcgggcacatgaatattctttatctcctg
ctaagcgtagagattaagaaggagtcatttgctaagacaggtaaaaacataaatctatta
ttcatagaggaacctgaggcgcatacacaccctcagatgcaatatgtttttgctaatcag
ataaaaagcatattgaacgacattgaaaatatccaggcggtaattactactcattcctct
catattgtatctcaatgcgatttcaaagatattaggtatttgcaaaactcagatggttgt
acaagggtaaagaatttccattcggaattgaaagccaaatacggtaaggacgaagattca
tttaaatttctagagcagtacctgaccctcaactcttgtgagcttttctttgcaagcaaa
gttatatttattgagggtgttactgagcggatgttgtggccgtacttcgtagagttattt
gataagtcgaaggttcaaagtaaagaacatatttcgttattctcccagaatgtcacaatt
ttggaagtcggtgctaatgctaaggctttcaagcatttccttgattttttagaaattaag
actctggtcatcactgatatcgatacaaccaaaaaaactattgatactaaaaaggcaaac
ccgagaactatctatccatcctttaaagttgcaggtgcagatcataccagcaatgctacg
ctgaaacactattatgacgcgcccgatttctctgaggaggctaagttttccagctggttt
gaaaagttagtcgcacacgaactaaagcattcgtatcctaaaattcatattgcttatcag
aaaaaagaagaaggctaccacgctaggagttttgaagatgcttttgtgcatctaaatagg
gacgtaatcaaaaagaaaattgataatatcaatgggctgaaaaatacgcacgaatttgat
ggcgcgcttgatgcgtatgatctgattgaaacagttttagataagaagtctgcgttcgcg
tcttctctgttgtacctagcactgacggatgatgaagtcacttggcgtattccggcttat
atcggggaggcgttggaatggatatcggaatga
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