Pseudomonas sp. TCU-HL1: THL1_5696
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Entry
THL1_5696 CDS
T05373
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_5696
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
Other families
THL1_5696
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AOE88243
UniProt:
A0A1B3EFE4
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All DBs
Position
complement(6183167..6184081)
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AA seq
304 aa
AA seq
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MTEETGKTPIPDRACPVNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAQGV
GVSEPTIVRFCRAIGCGGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADFSLKIFDTTLH
TLMEVREKLDPEALQRAIGACAQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPH
MQAMSAVTLKPSDVAICISQSGRSKDLLITANLVREAGATLITLCPSQTPLADLATVNLA
IDVQEDTEIYTPLTSRIAHLVVIDVLAMGVAMARGPTLVNHLKSVKRSLRSLRLSPKSVK
SAED
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaaaccggcaaaacccccattccagacagagcctgccctgtgaacctgctg
caacatatcgctcagtcgcggcacctgctgcgcaagtcggaactgaaagtcgccgaccac
gtcctgctcgatcccgctgcggtcatgcacagctccatggccgatctggctcagggggtc
ggggtcagcgaacccaccatcgtccgcttctgccgcgccatcggctgtggtggcttccag
gacctgaagctgaaactggcgcagagcctggccgccggagccagcttcggccagtttgcg
atccatgaagatgattcggtcgcagacttcagcctgaagatattcgacaccaccctgcac
accctgatggaagtccgcgagaaactcgaccccgaagccctgcagcgtgccatcggtgcc
tgcgcccaggcccagcgggtggagttctatggcttcggcgcttccggtgcggtagccgcc
gatgcccagcacaaattcttccgcctgctgctcacggcggcggcctattccgacccgcac
atgcaggcgatgtcggcggtcacccttaagccctcggacgtggccatctgcatttcccag
tcgggccgctccaaggacctgctgatcaccgccaacctggtgcgcgaggccggcgccacc
ctgattaccctctgcccgagccagacgccattggccgacctggccacggtgaacctcgcc
atcgacgtgcaggaagacaccgaaatctacaccccgctcacctcgcgcatcgcccacctg
gtggtgatcgacgtgctcgccatgggcgtcgccatggcccgtggcccgaccctggtcaac
cacctcaagagtgtgaagcgaagcctgcgcagcctgcgcctgtcgcccaaatcggtgaag
agcgccgaggactga
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