KEGG   Pseudomonas sp. TCU-HL1: THL1_73
Entry
THL1_73           CDS       T05373                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pset  Pseudomonas sp. TCU-HL1
Pathway
pset03030  DNA replication
pset03410  Base excision repair
pset03420  Nucleotide excision repair
pset03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pset00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    THL1_73
   03410 Base excision repair
    THL1_73
   03420 Nucleotide excision repair
    THL1_73
   03440 Homologous recombination
    THL1_73
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pset03032]
    THL1_73
   03400 DNA repair and recombination proteins [BR:pset03400]
    THL1_73
Enzymes [BR:pset01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     THL1_73
DNA replication proteins [BR:pset03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     THL1_73
DNA repair and recombination proteins [BR:pset03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     THL1_73
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     THL1_73
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AOE82622
UniProt: A0A1B3DZA3
LinkDB
Position
69173..71923
AA seq 916 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSAGLPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QSAAGGRPVVISTGDKDMAQLVDGHITLVNTMTGSTLDVDGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLDVLYSSLEKVPELPIRGAKGLPAKLEEHKDM
AYLSYKLATIKCDVELNVEIDSLHPGEPDREALAELYRTLEFKTWLDDLQRQAAKSSGEQ
LALEEAPAAEAEKRYEIVLEQARFDAWLKKLEAAPLFAFDTETTSIDAQQAQVVGVSFAA
EAGEAAYVPLAHSYMGVPAQLDRDAVLKALKPLLEDPKKLKVGQHAKYDMNVLANATTPI
AVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIALEQ
AGPYAAEDADVTLRLHQTLWQKLEAIPSLVKVLKEIEMPLVPVLARIERNGAYVDAKLLG
QQSLELGTKMVELERQAFELAGQEFNLGSPKQLGAILYEKLGLPVLAKTATGQPSTAENV
LADLAEQDYELPKVIMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSST
DPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDRD
VHRATASEVFGVPLDEVSNNQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYF
ARYPGVLAYMERTREQAAQQGFVETLFGRRLYLPEIHSKNQAMRKGAERTAINAPMQGTA
ADIMKRAMVAVDDWLQESGPDARVILQVHDELVLEVREDLLEQVSEQIRPLMSGAAELDV
PLVVEVGVGDNWDEAH
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgagccaagcccctctcgtcctggtggacggatcttcctacctgtaccgcgccttccat
gccctgccaccgctgacgacgtccgccggcttgcccacgggtgcggtcaaaggcgtgctg
aacatgctcaagagcctgcgccggcaatacccggacagccctttcgcggtggtcttcgac
gccaagggcggtaccttccgcgatgagatgttcgccgagtacaaggccaatcgcccctcg
atgccggacgagctgcgggtgcaggtggagccgctgcacgccagtgtgcgtgccctcggc
ctgccgctgctctgcgtggaaggtgtggaggccgacgatgtgatcggcaccctggcccgg
caaagcgccgcgggcgggcgtccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattacgctggtcaacaccatgaccggtagcacgctggacgtcgat
ggcgtgaaggagaaattcggtgtcggtcctgaactcatcatcgattacctggcgctgatg
ggcgacaaggtcgacaacattccaggcgtgcccggcgtcggcgagaagacggctctcggc
ctgctcaccggtgttggcggcggcctcgatgtgctctacagcagcctggagaaagtcccc
gaactgccgatccgcggcgccaagggcctgccggccaagctcgaagagcacaaggacatg
gcctatctgtcctacaagctggccaccatcaagtgcgacgtcgaactgaacgtcgagatc
gattccctgcaccccggcgagccggaccgcgaggctctggccgagctgtaccgcaccctg
gaattcaagacttggctggacgaccttcagcgccaggcagccaagtccagcggcgaacag
ctggcgctggaggaagcaccggccgccgaggccgagaaacgctacgagatcgtactggaa
caggccaggttcgatgcctggctgaagaagctcgaggccgccccgctgttcgccttcgac
accgagaccaccagcatcgatgcccagcaggcgcaggtggtgggtgtgtcctttgcggcc
gaggccggcgaagcggcctatgttccgctcgcccatagctatatgggcgtgccggcgcag
ctcgaccgtgatgccgtgctcaaggcgctcaagccgctgctggaggacccgaagaagctc
aaggtcggccagcacgccaagtacgacatgaacgtcctggccaatgccaccacgcccatt
gccgtgcagggcatcgccttcgacaccatgctcgagtcctatgtattggactccacggcg
acccgccacgacatggacagcctggccctcaagtacctgggccacagcaccatccgtttc
gaagacatcgccggcaagggcgccaagcagctgaccttcgaccagatcgccctcgaacag
gccggcccctatgcggccgaggatgccgacgtcaccctgcgtctgcaccagactctctgg
cagaagctggaagctatcccgtccctggtcaaggtgctgaaggagatcgagatgccgctg
gtaccggtgctggcgcgcatcgagcgcaacggcgcctatgtcgacgcgaagctgctgggc
cagcagagccttgagctgggcacgaagatggtggaactggagcggcaggcctttgagctg
gccgggcaggagttcaacctcgggtcgcccaagcagctcggtgccatcctctatgaaaag
ctcggcctgccggtgctggccaagacggctaccggccagccttccactgcggaaaacgtt
ctggccgacctcgccgagcaggactacgaactgcccaaggtgatcatgcagtaccgctcc
ctgagcaagctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgcacc
gggcgcatccatacctcctaccaccaggcagtggcggccaccgggcgtctatcgtccacc
gacccgaacctgcagaacatcccgatccgcaccgccgagggccggcgcattcgccaggct
ttcgtcgcgcccaagggttacaagctgctggcggcggactattcgcagatcgagctgcgc
atcatggctcacctggccaaggacgaaggcctgctggacgccttccgccacgatcgcgac
gtgcaccgcgccaccgcctccgaggttttcggcgtgccgctggacgaggtcagcaacaac
cagcgccgtagcgccaaggcgatcaacttcggactgatctatggcatgagcgccttcggc
ctggccaagcagatcggtgtcgagcgcaaggaggcccaggcctacatcgaccgctacttc
gcccgttatcccggcgtgctcgcctatatggaacgcacccgcgagcaggccgcgcagcag
ggcttcgtcgaaacgctgtttggccgccgcctgtacctgccggaaatccattctaagaac
caggccatgcgcaagggagccgagcgcaccgcgatcaacgcgccaatgcagggcaccgcg
gcggacatcatgaaacgcgccatggtggcggtggatgactggttgcaggaaagtgggccg
gacgcccgtgtcatcctccaggtgcacgacgaactggtgctggaagtgcgcgaggacctg
ctggagcaggtcagcgaacagattcgcccgctcatgagtggcgccgccgagctggacgtg
ccgctggtggtggaagtgggcgtgggcgataactgggatgaggcgcactga

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