Pseudomonas sp. TCU-HL1: THL1_950
Help
Entry
THL1_950 CDS
T05373
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00260
Glycine, serine and threonine metabolism
pset00460
Cyanoamino acid metabolism
pset00630
Glyoxylate and dicarboxylate metabolism
pset00670
One carbon pool by folate
pset00680
Methane metabolism
pset01100
Metabolic pathways
pset01110
Biosynthesis of secondary metabolites
pset01120
Microbial metabolism in diverse environments
pset01200
Carbon metabolism
pset01230
Biosynthesis of amino acids
pset01240
Biosynthesis of cofactors
pset04981
Folate transport and metabolism
Module
pset_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THL1_950
09102 Energy metabolism
00680 Methane metabolism
THL1_950
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THL1_950
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
THL1_950
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
THL1_950
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
THL1_950
Enzymes [BR:
pset01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
THL1_950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AOE83498
UniProt:
A0A1B3E1S9
LinkDB
All DBs
Position
complement(1023171..1024424)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTLLGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMAQV
FIDRGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEVECRELATWICDILENMGDESVVDRVREQVKAICAKLPVYGK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgacctgttcgccgccatggag
caagaagcccagcgccaggaagaacacatcgagctcatcgcctccgagaactacaccagc
ccggcggtcatggaggctcagggctccgtgctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgcgccaagcaactgttcggcgccgactacgctaacgtccagccgcacgccggctcccag
gccaacgcagctgtctacctggccctgctgtcggccggtgataccctcctcggcatgagc
ctggctcacggcggtcacctgacccacggcgccagcgtgtcctcctccggcaagctgtac
aacgccgtgcaatacggtatcgacgccaatggcctgatcgactacgacgaagtcgagcgc
ctggccgtagagcataagccgaagatgatcgtcgccggcttctccgcctactcgcaggtc
ctcgacttcccgcgcttccgtgccatcgccgacaaggtaggtgcctacctgttcgtcgac
atggcccacgttgccggcctggtcgccgctggcgtctacccgaacccggttcccttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctcaactccgccgtgttccccggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaggccgtgtgcttcaaggaagccctgcaa
cccgagttcaaggcttaccagcagcaagtggtgaagaacgcccaggccatggcccaggtc
ttcatcgaccgcggtttcgacgtggtttccggtggcacccagaaccacctgttcctgctc
agcctgatcaagcaggacatcaccggtaaggatgccgacgctgccctcggccgcgccttc
atcaccgtgaacaagaactccgtaccgaacgacccccgctcgcctttcgtcacttccggc
ctgcgcatcggtaccccggccgtgaccactcgtggcttcaaggaagtcgagtgccgcgag
ctggccacctggatctgcgacatcctggagaacatgggcgacgagtccgtggtcgaccgc
gttcgcgaacaggtcaaggccatctgcgccaagctgccggtttacggcaagtaa
DBGET
integrated database retrieval system