Pseudomonas sp. TCU-HL1: THL1_982
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Entry
THL1_982 CDS
T05373
Name
(GenBank) type 4 fimbrial biogenesis PilY1 signal peptide
KO
K02674
type IV pilus assembly protein PilY1
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pset02044
]
THL1_982
02035 Bacterial motility proteins [BR:
pset02035
]
THL1_982
Secretion system [BR:
pset02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
THL1_982
Bacterial motility proteins [BR:
pset02035
]
Pilus system
Pilus assembly proteins
THL1_982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
Motif
Other DBs
NCBI-ProteinID:
AOE83530
UniProt:
A0A1B3E1Z3
LinkDB
All DBs
Position
1059093..1062119
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AA seq
1008 aa
AA seq
DB search
MRTGFLKGILAASALSFYLPVQAEDIDLFVGTTPSANDVPNVLVVLDNTANWNNAFTNEM
AALSTVLSGLDANKFRLGLMMFTETGQGNSNTDGAYVRAAIRLLDSSNKTKYQQLVQSLH
ITDDKSNGGKVGLAMWEAYQYFSAGAPHAGNGKKKTDYSGNATGTTASNAVYALAGNALA
AKGATAYNTPIASGCAKNFIIYISNGAAQDNNADTTAGKSALAAAGGRTTTIPISPSGSQ
DNVADEWARFMKSSDLGIVTYTIDVNKVTTGQGPGWTALLKSMAGVSGGKYFDVTSTGSE
IADALRTALSEIQSVNSAFASVSLPVSVNTQGTYLNQVFIGMFRPDEHLGPRWAGNLKQY
KLGLSNGALRLQDAAGNSAINTSTNFITECARSFWTPTSLDTYWQNKPQGACLTVANSDI
SNTPDGNVVEKGGQGYLLRSGTSRTVYTCNPSFASCTQLTDFATTNTNITSSLLGVADAE
RTNLINWARGLDVNDEDQDLVTTEEKRQSAHGDVVHSRPVAIDYGTTGSPQVVVFYGGND
GVFRAINGNRTDSIGSVAAGGELWSFVPPEFYGKLSRLRTESPTIAFQGSTGGQPKSYGI
DGPITAFRGTIDTTQKTYIYAGMRRGGRALYAFDVTTPASPSLKWKVGCPNLANDDGCSS
QMSGIGQTWSSAVVLKAAGYGAGNSPMLIMGGGYDSCEDTDDGTVNHSCTSSSKGKKIYV
LDANTGQVLKVLDTKRGVVGDITVVPDSSGLAKYAYAADVGGNVYRVTIGSGEPNDWTIA
RIASFGCADGGSCSSNRKFLFAPEVVVATDGYLLQIGSGDREKPLSSFPATARVANYFFN
FKDRPTESGWLSTDGTCSADGENFICLNSLLAISGDSTPTQEQLNAKPKGWYLGLAASEQ
VVTSAITVFGRIVFNTHQPTPPDPNACSGLGTNRAYNIAYKDASGLDGDRFVVLDGGGLS
PSPVAGKVRLDDGTELPFVCTLECFEPDPEFSAVTRPKGRVYWSIDRE
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgagaacggggttcttgaaaggaattttggcggcgtcggccctgtcgttctatttgccc
gtccaggcggaggacatcgatctgttcgtgggtactacacctagcgccaacgacgtgccg
aatgtgcttgtcgtgctggacaataccgcgaactggaacaacgccttcaccaatgaaatg
gctgcgctgagcaccgtgctgagtgggctggacgccaacaagttccgcctgggtctgatg
atgttcaccgaaaccgggcagggcaactccaacacggatggcgcctacgtgcgcgccgcc
atccgcttgctggacagcagcaacaagaccaagtaccagcaacttgtgcaaagcctgcac
attaccgacgacaagtcgaatggtggcaaggtcggccttgccatgtgggaggcctaccag
tacttctccgctggggcgcctcacgcaggcaacggcaagaagaagacggactattccggt
aacgccacgggtactactgcgtcgaacgcagtctatgcccttgccggcaatgccctggct
gcgaagggtgcgacggcatataacacgccgatagcctccggatgtgccaagaacttcatc
atttacatcagcaacggggccgcccaggacaacaacgctgatactactgccggcaagtca
gccctggcggcggccggcggccggacgactactatccccatctcgcccagtggttcgcag
gacaatgtggcggatgagtgggcgcgcttcatgaagagcagtgaccttggcatcgtcact
tacacaatcgacgtcaacaaggtgaccaccggccaggggccgggctggacggcgctgctc
aaaagtatggcgggcgtcagtggtggcaagtacttcgatgtgaccagcactgggagcgag
atcgccgacgccctgaggacggcgctttccgagatccagtcggtgaacagtgcgttcgcc
tcggtcagtttgccggtgagcgtgaacacccaggggacctacctgaaccaggtgttcatc
gggatgttccgccccgatgaacacctggggccgcgctgggccggcaatctcaagcaatac
aagctgggcctcagcaatggtgccctgcggctgcaggatgctgccggcaactcggcgatc
aacacttcgaccaacttcatcactgagtgcgcccgtagcttctggacgcccacgagcctc
gacacctactggcaaaacaagccgcagggcgcttgcctgacggtggccaattccgacatc
tcgaatacgccggacggcaacgtggtcgagaagggcggacagggttacctgctgcgcagc
ggcaccagccggacggtctacacctgcaatccgtctttcgcctcctgcacccagctaacc
gactttgccaccaccaacacaaacatcacctcgtccctgcttggcgtcgccgatgccgag
cggaccaatctgatcaactgggcgcgcggcctggacgtgaatgacgaggatcaggatctg
gtcaccaccgaggaaaagcgccagtccgcccatggtgacgtggtgcattcgcgtccggtg
gcaattgactacggcaccaccggttcaccgcaggtcgtagtcttctatggcggcaacgat
ggtgtattccgggcgatcaacggcaatcgcaccgatagcattggctccgttgcggcaggt
ggcgagctgtggtccttcgtcccgccggagttctacggcaagttgagtcggttgcgcacc
gaatccccgaccatcgccttccagggcagcacgggcggccagccgaagagctatggtatc
gacggtcccatcacggccttccgcggcaccatcgacactacgcagaagacctatatctat
gccggcatgcgacgtggtgggcgggccctctatgcattcgacgtcaccaccccggccagc
ccctcgctgaaatggaaggttggctgcccgaatcttgcaaatgatgatggctgctccagc
cagatgagtggcattgggcagacctggtcctcggcagtggtgttgaaggctgcgggttat
ggggccggcaactcgccgatgcttatcatgggggggggctatgacagttgcgaggatacc
gatgacggcacggtcaatcactcctgtacatcctccagcaagggtaagaagatctacgta
ctggatgccaataccggacaggtgctgaaggtgctggataccaagcgtggtgtggtcgga
gacatcactgtagtgcccgacagctcgggtttggcgaaatatgcctatgccgccgatgtt
ggaggcaatgtctaccgcgtaaccatcggcagcggcgagccgaacgattggaccatcgcc
cggattgcctcgttcggctgtgcggatgggggaagttgctccagcaaccggaagttcctg
tttgccccggaagtggtggttgcaactgatggctatctgctccagattggctccggcgac
cgggagaaaccgttgagcagcttccctgcaacagcgcgggttgccaattacttcttcaac
ttcaaggatcggccgaccgaatcgggctggctgagcacggacggcacctgttcggctgat
ggggaaaacttcatctgcctcaattccctgctggcgatatccggcgattccacaccgacc
caggagcagctgaatgccaagcccaagggttggtaccttggcctggcggcatccgagcag
gtagtgacttcggctatcacggtgttcggccggatcgtcttcaatacccatcaacccacc
ccaccggatccgaatgcctgttccggtctgggcaccaatcgggcgtacaacatcgcctac
aaggatgcctcgggcctcgatggggacaggtttgtcgttcttgacggcggcggactttcg
ccctctccggtggcgggcaaggtgaggctggatgatggtacggagctgccgttcgtctgc
actctcgagtgcttcgaaccggaccccgagttctccgctgtgacacgacctaaaggccgg
gtttattggagcatcgacagagaatga
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integrated database retrieval system
