Thalassoporum mexicanum: Pse7367_0031
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Entry
Pse7367_0031 CDS
T02369
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseu
Thalassoporum mexicanum
Pathway
pseu03420
Nucleotide excision repair
pseu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pse7367_0031
03430 Mismatch repair
Pse7367_0031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseu03400
]
Pse7367_0031
Enzymes [BR:
pseu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pse7367_0031
DNA repair and recombination proteins [BR:
pseu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pse7367_0031
MMR (mismatch excision repair)
Other MMR factors
Pse7367_0031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DEAD
AAA_30
DUF3138
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFY68351
UniProt:
K9SEH0
LinkDB
All DBs
Position
38834..41227
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AA seq
797 aa
AA seq
DB search
MTIAPQLATQLAELHASLRAGQQQMAQWQSGELAVSAVPGAGKSTGMAVAAVITIANNQL
SRQRQLVVVTFTRSAASNIRRKIRKHLQELRLPQSAFTVNTLHGLAFSIASSHAELSGFS
AAETQIISEPRKLGLIKQAANRWLRKNPRLYEMLLEGRGFDGEDAERLRRQTILRTEVLP
ALAREAIATAKSAKLSPDDLRYADAGEILEVAAGLYETYQSLLHKQGMIDYDDMILGALR
VLAQDSVQQYWQERVFAVFEDEAQDSSPLQTKLLEQLAVVRPQGRDAEMGGDRADLDRQN
RDLEQRNNSQSVVNLDGANNQEGQQERHPENQNLNLIRVGDPNQAINSTFTNADPRFFNQ
FCDRAQSRGRLVSLDQAGRSSSRIMASANQVLDWVNSSTYAQPEPPFRQQHIRAVDPGDP
QPNANPAPLPSRGNGLEINFPPNINHTVRLLYDRAQQLLAQNPELSMAVLVRQHNQGRFV
CEELENFNRDHPDPIRVYDVEQRDRRSRVPEDMLAILQFLDRPHSPDNLKAALRVLSKRQ
IIKPQDLDALASLPEQFLYPTALDPNFTPIAIAARHICTGLLRAKLELPPYNLIAFIALT
LRYDQGELATADKLSDRLSSQLEEYNLAAMVAALQDIVTSESFEAVEDENLEDRYTRSGQ
LTVISMHKAKGLDWDVVFMPFLHKRIIPGELFQKEAVKFLGEFTLPEVARAQIRAMIHGE
LIPDPTVAWSRCQSLKQAEEFRLLYVGMTRAKRLLWLSAARSAPFSWNNRDNLTDNADVC
PALKTLVDSFPDAIGND
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcaccgcaactggcaacccaactggccgaattacatgcttccttgcgagcc
ggacagcaacagatggcgcaatggcaaagcggagagctggcagtttcggcagtgccaggg
gcagggaaatcaaccggcatggcggtggcggcagtgattacgatcgccaacaatcaactc
agtcggcagcggcaattggtggtggttaccttcacccgatcggcagccagcaacattcgc
cgcaaaattcgtaaacatctacaagagttgcgattgccccaaagcgcctttacggtgaat
actttgcatggtttggcttttagtattgccagttcccatgctgaattgtcgggatttagt
gcggcggaaacccagataatttctgagccgcgcaagctgggtttaattaaacaggcggcg
aatcgatggttgcggaaaaatcctcgcttatatgagatgttgttggaaggtagggggttt
gatggcgaagatgcagagcgattgcggcggcagacgatcctacgcaccgaagtgctgcca
gccctagcacgggaggcgatcgccacggccaagagtgccaaactatcgccggatgacttg
cgctatgcagatgcgggcgaaattttagaggtcgccgctggtttatatgaaacctatcaa
agcctgttgcataagcagggcatgattgactatgacgatatgattctgggggcgctgcgg
gtactggctcaggattccgtgcagcaatattggcaggaacgggtatttgcggtgtttgaa
gacgaagcgcaggattcttcaccattacaaactaaattgctcgaacaattggcagtagtg
aggccacagggtagagatgctgagatgggtggcgatcgcgctgatttagatcgccagaat
cgagatcttgagcagaggaataatagccaatctgttgttaatcttgacggcgctaacaat
caagaggggcagcaagagaggcatccagagaatcaaaacttaaatctaattcgggtgggc
gatcccaatcaagcaattaattccacttttacgaatgccgatccgcgcttttttaatcaa
ttctgcgatcgcgcccagagccgggggcgattggtcagcctcgatcaagccggacgcagc
agcagcaggattatggccagcgccaatcaggttttagattgggtgaatagctcaacctat
gcccaaccggaaccaccattccggcagcaacatattcgtgccgtcgatcctggcgatccc
caacccaatgccaatcccgccccattgccaagccgtggtaatggcctagaaattaatttc
ccgcctaatatcaaccatacagtacgtttgctctacgatcgcgcccagcagctattggcg
cagaatccagaattaagcatggcggtgctggtacggcaacataatcaaggtcggtttgtg
tgcgaggaactggaaaacttcaaccgcgatcaccctgatcccattcgcgtttatgacgtg
gaacaacgcgatcgccgttcccgcgtaccagaagacatgctagccatattgcaattcctc
gatcgcccccattcaccggataacctcaaagcagcgctgcgggttctgtccaaacggcaa
attattaagccccaggatctcgatgccctggccagcttaccggaacagtttttatatccc
accgcacttgatcccaacttcacccccattgcgatcgcagcaaggcatatttgcaccggg
ctgctgcgtgccaaactggagctacccccatataacctcatcgcttttattgccctcaca
ttaaggtatgaccagggagaactagctactgccgacaaacttagcgatcggcttagttcg
caactagaggaatataatctagcggcaatggtggcagccttgcaggatatcgtaacttcc
gagagttttgaagcggttgaagatgagaacctcgaagatcgctacacccgttcaggtcaa
ttgaccgtaatcagtatgcacaaggctaaggggctggattgggatgtggtattcatgccg
tttttgcataagcgaatcattcctggcgaactatttcagaaggaggcggttaagttctta
ggcgaattcacgttgccagaagttgcccgcgcccaaattcgcgccatgattcacggcgaa
ctgatccccgatcccactgtagcctggagtcgatgccagagcctcaaacaggcggaagaa
tttcgattgctgtatgtgggcatgaccagagcgaagcgattgctgtggttgtctgcggct
cgttccgcaccatttagctggaacaatcgagacaatcttaccgataacgctgatgtttgc
ccagccctgaaaactttggtagatagcttccctgacgcgatcgggaatgactaa
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