Pseudanabaena sp. PCC 7367: Pse7367_0119
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Entry
Pse7367_0119 CDS
T02369
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
pseu
Pseudanabaena sp. PCC 7367
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseu03021
]
Pse7367_0119
Transcription machinery [BR:
pseu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pse7367_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_Crp_2
Sigma70_ECF
HTH_17
SpoIIID
CMV_1a
DUF1778
HTH_23
HTH_24
ThylakoidFormat
KORA
SAGA-Tad1
Crp
Motif
Other DBs
NCBI-ProteinID:
AFY68437
UniProt:
K9SCU2
LinkDB
All DBs
Position
146141..147673
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AA seq
510 aa
AA seq
DB search
MSPEVPQIKENQTLNLIKAYQSNSSTEIQTKLVELHEQLVHEAVGGIARRADNVYGRLFD
VGLAGLLRSFQTYQPIENSEFVDFAAACVDDSLRGYLMELLQRSSEHDCAIAAANKADRQ
SQKTTSTSIPAPRNPSSKNSQSATGSKSSKSNQAAASNQSNQIDARKATQAHKSFQLSAQ
DRERLVKLLNHPDNFKLSGSDRRRFQQLVMIWDFVDATFAQSESNLAAPEQDDDNAEISA
SDYVKYVDAIAEQREDHSGPLKSTSMQLLQEYRRSPSAELRNRLVQINIGLVRKEAFHWT
NQCTETFDDLVQVGSIGLIRAVERFDIARGRAFSSFAVPYIRGEIQHYLRDKSPTLRMPR
RWLVLYNQASKVVRELRAQLGREPTDREVAKVIEIEEAEWQEIKLACQNRSPLSLDAPMS
DDDDTTLSLGDLLTDHKYRSFQLSQEDSLRLYQALSHLEDRTRQVVEFVFLKELTHREVA
DILGISAVTVSRQVKKGLVTLKKVMTTPIE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagaggtgcctcaaatcaaggaaaatcaaaccctaaacctgatcaaggcttat
caatctaattcgtctacagaaattcagactaagttggtcgagctccacgagcaacttgta
catgaagcagttgggggaattgctagacgagcagataatgtctatggcagattgtttgac
gttggcttggcagggctgttgcgatcgtttcaaacctatcaaccaatcgaaaatagtgaa
tttgtcgattttgctgctgcctgtgttgacgatagcctgaggggctatttgatggagctg
ttgcaacgatcgtcggagcatgattgcgcgatcgctgctgctaacaaggccgatcgccaa
agccagaaaactacatctacatctataccagcaccgcgaaatcctagcagcaaaaacagt
caatcggctaccggctcaaaatcatccaagagtaatcaagcggcagcgtccaatcagtcc
aatcagatagatgctcgcaaagcaactcaagcccataaaagttttcagctatctgcccag
gatcgtgagcggttagttaagctgctcaatcatcctgacaatttcaaactttcaggtagc
gatcggcggcgatttcaacaattggtaatgatttgggactttgtagacgcaacgtttgca
caatctgaatctaatctggcagcgcctgagcaggatgatgataacgcagaaatttccgct
agcgactatgttaaatatgttgatgcgatcgccgagcagcgtgaagatcactccggccca
ctcaaatcaaccagtatgcaactgttgcaggaatatcggcggagcccttcggccgaatta
cgcaatcgcctggtgcaaattaatattggcctagtgcgtaaagaagcttttcactggact
aatcaatgtactgagacctttgatgacctggtgcaggtcggtagcattggcttgatcagg
gcggtagaacgatttgatattgccaggggacgggcgtttagctcctttgcagttccctat
attcgtggtgagatccagcattatttgcgtgataaaagccctactttgcggatgcccagg
cgttggctggtgttgtataaccaggctagtaaggtggtgcgtgaattacgagcgcagcta
ggtcgtgagccaaccgatcgagaggtggctaaggtaattgaaattgaagaagctgaatgg
caggaaattaaactggcttgccaaaatcgatcgccgcttagcctcgatgcaccaatgagc
gatgacgatgacaccaccctatcattgggagatttgttaactgaccataaataccgcagc
ttccagctatcccaggaagatagcttgcgattatatcaggctctctcgcacttggaagat
cgcacccgccaggtggttgaatttgtgtttttaaaagagttaacccatcgagaggtggcc
gatattttgggcattagcgccgttacggtttcgaggcaagtaaaaaaaggattggtaacc
cttaaaaaggtgatgactacgccaattgagtaa
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