Thalassoporum mexicanum: Pse7367_0455
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Entry
Pse7367_0455 CDS
T02369
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pseu
Thalassoporum mexicanum
Pathway
pseu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pse7367_0455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseu03021
]
Pse7367_0455
03400 DNA repair and recombination proteins [BR:
pseu03400
]
Pse7367_0455
Enzymes [BR:
pseu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pse7367_0455
Transcription machinery [BR:
pseu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pse7367_0455
DNA repair and recombination proteins [BR:
pseu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pse7367_0455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFY68766
LinkDB
All DBs
Position
575588..577465
Genome browser
AA seq
625 aa
AA seq
DB search
MARIEQRFDYVKIGIASPERIRQWGERILPNGSVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKGI
PSYMATLLDMPLRDVEQIVYFNAYVVTDAGNHPNLTFKQLLTEDQWLEIEDQIYAEDSEL
EGIRVEIGAEAIQYLLQNINLEEEAEQLREDIANSKGQKRAKLIKRLRVVDNFVATGSKP
DWMVLEVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPNLRIHQCGLPKEMAIELFQPFVINRLIKAGLVNNIKAAKKLIQRDDPAVWDVLEE
VIRDHPVMLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNIMSPATGRPIITPSQDMVLGCYYLTADNHLNQKGAGHYYASFKDV
IMSYEQGHVELHAKIWVRFDGKVQGDGIGDGEEPEVQESGDGSKLKTYKSLRVREDSDGN
LLSQYVLTTPGRVILNQAILDSLAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaatagagcagcggtttgattatgtaaaaatagggatcgcttcaccggaaaga
atcaggcagtggggtgaacgcatcctgcccaatggtagtgttgtaggtgaggtgaccaaa
ccagaaaccattaactaccgcaccctcaagccagaaatggatgggttgttttgcgagcgc
atttttggcccagccaaagactgggaatgccattgtggtaaatacaagcgggtgcgccat
cgcggtattgtctgcgagcgctgcggcgtggaagtaactgaatcacgggtacgccgccat
cggatgggtttcatcaagttggctgccccagttacccatgtttggtatctcaagggcatc
cccagttatatggcaactttgctggatatgccgctgcgggatgtggagcaaattgtttac
ttcaatgcctatgtggtaaccgatgcgggcaatcatcctaatcttacgttcaagcaactc
ctgacagaggatcaatggctggagatcgaggatcaaatctatgctgaagattctgagcta
gagggcattagggttgaaattggtgctgaagcaattcaatacctgctccaaaatataaat
cttgaagaagaagcagagcaactgcgcgaagacattgccaattccaagggtcaaaaacgc
gccaagttaatcaaacgcctgcgggtagtggacaactttgtggccacgggttccaagcca
gattggatggtattggaagtaattcccgtaattccgcctgatctgcggccaatggtgcag
ttagatggtggccgatttgccactagcgatctcaatgatttatatcggcgcgtgatcaat
cgcaacaatcgcctcgccagactacaggaaattctggcaccggaaatcattgtccggaat
gaaaagcggatgctgcaagaggcggttgatgccctgattgataatggtaggcgtggccgc
accgtggtaggtgccaacaatcgccccctcaaatccctgtctgacattattgaagggaag
caagggcggttccgccaaaacttactcggtaagcgggttgactattccggccgatcggta
attgtggttggacccaatctgcgcattcatcagtgcggcttgcccaaggaaatggcgatc
gaactgtttcagccatttgtgatcaatcgcttgatcaaagctggcctggtcaacaatatc
aaagccgccaaaaagctgatccaacgggatgatccggccgtgtgggatgtgctagaagaa
gtaatccgcgatcacccggtaatgctaaaccgcgccccgacattgcaccgattgggaatt
caggcatttgagccaattttagttgatggccgcgccattcaattgcacccgcttgtttgc
ccagcgtttaatgctgactttgatggtgaccaaatggcggttcatgtgcctttgtcctta
gaagctcaggccgaagccagactattgatgttggcctcgaataacattatgtcgccagct
accggtaggccaattattacgcctagccaagatatggttctaggctgctattacctgacc
gccgacaatcatctgaatcaaaaaggtgctggccattattatgccagtttcaaggatgta
attatgtcctacgaacagggacatgtggaactccacgccaaaatctgggtgcgctttgat
ggcaaagttcaaggtgatgggatcggcgatggcgaagaacctgaagtgcaagaaagtggt
gatggttctaagttgaaaacctacaaatctttgcgagtcagggaggatagcgatggtaat
ttgctttctcaatatgtactgacaacaccaggtcgggtgattttgaaccaggctattctc
gactcgttggccagttag
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