Pseudanabaena sp. PCC 7367: Pse7367_0456
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Entry
Pse7367_0456 CDS
T02369
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pseu
Pseudanabaena sp. PCC 7367
Pathway
pseu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pse7367_0456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseu03021
]
Pse7367_0456
03400 DNA repair and recombination proteins [BR:
pseu03400
]
Pse7367_0456
Enzymes [BR:
pseu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pse7367_0456
Transcription machinery [BR:
pseu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pse7367_0456
DNA repair and recombination proteins [BR:
pseu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pse7367_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
Apocytochr_F_C
RNA_pol_Rpb1_3
DUF5605
Motif
Other DBs
NCBI-ProteinID:
AFY68767
UniProt:
K9SDU5
LinkDB
All DBs
Position
577745..581950
Genome browser
AA seq
1401 aa
AA seq
DB search
MADLTVNGAESNRSKDKTTPAVFINQTVDKKQLKNLISWAFTHHGTARAAYMADEIKALG
FRYATQAGVSISVEDLQIPPSKKQLLAEAEEEIEATENRYSRGEITEVERFQKVIDTWNV
TNENLKNEVVKNFKVNNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGAIIDLPIK
TNFREGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRETDCGTTRGV
VTQAMKDGDRVLIPLRDRLFGRTAAIDVTDPKTGEVIVAAGQCFSEELSIAVEKSGVKLV
KVRSALTCESTRSVCQTCYGWSLAHAKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGV
FTGEIAQQSRAKFVGSIKFSKNLRLRPIRTRHGDDAYIVEAPGEFMLESKEGRKKSYSVT
QGSTLLVQDGQQVEKDQLMAEVAISGRTKKSTEKAKKELKTNLSGEALFSGLVPEEKKDR
QGNTSYIATRSGLIWILGGQVYNLLPGADPVVKNGDRVEIDDVLAVTELVTEHGGVVRLK
DEDARHNREVEIITASVVLDRAKVEEEVSQSREHYILHTASGQRFLLKAAPGTKVTSNQV
VAELIDDTYHTNSGGIIKYSGDLEVAKRSKAKQGFEVLKGGTLLWIPEEAHEVNKDISLL
LVEDGQYLEAGTEVVKDIFCQSSGVVEVTQKNDILREIVIKPGDLHLVDDPQSALKKNET
LAQPGTEILPGLASEELRYVEYVETPEGPAILLRPVQEFSVPDKPSIPSQDSISEISSIR
LRAVQRIPYKDGERVKSISGLELLRTQLLLEIDTEAPQIAADIEFVADEEDPELLRLQLV
ILESLIIRQDTASDPTQTNTRTRILVEEAQQIAPGEVVARTEILCKQSGEIRGIKEGAEL
VRRILVVTEEDRISIPCADPQVAVGDLLRIGDSVGSNTIASESGQVRAIENGEVIVRIGR
PYLISPGAVLQIDNADLVQRGDILAFLVFERAKTGDIIQGLPRIEELLEARKPKEMCVLA
QRAGTVQVTYFEDDNFELKILEADGTLTEYSINPGQSLIVSDGQQLDAAEPLTDGPSNPH
DILDIFFNIHKEKVGIKEAALISLQKVQEFLVNEVQTVYQSQGVDISDKHIEVVVKQMTS
KVRIDDGGDTTRLPGELVDLHQVEQINEAMEITGGAPAEYTPVLMGITKASLNTDSFISA
ASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYDNMSLDIDDSYESIPD
FDESTDDVIIDDNTARNYRIEGVGFTQDLPNRDNVRDVISSSSEELISDQSQANELVNSG
ADMLIGDDVKDLVGGEGLVGNVGGKPSYPGIAPQANLADELVDDHTTIGNNPDAPPSAPP
SISAAPNELGTEPGTIEDMPE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctaacagtgaacggcgcagaatcgaatcgctcaaaagataagacaacccca
gcggtttttatcaatcaaaccgttgacaaaaagcagctcaaaaatttaatttcctgggct
tttacccaccacggcacggccagagccgcttacatggctgatgagatcaaagcgcttggg
tttcgctatgcaactcaagcgggggtctcgatcagtgtggaggatttacaaattccgccc
agcaaaaagcaactcttggcagaggcggaagaggaaatcgaagcgaccgaaaaccgctat
tcacgcggtgaaattaccgaggtggagcgattccagaaagtgatcgacacctggaatgtc
accaacgaaaacctcaaaaatgaggtggtcaaaaactttaaggtcaataaccccctgaat
tcggtctatatgatggccttctctggggcaaggggtaacatttcccaggtgcgccagttg
gtagggatgcggggtctaatggccgatccacaaggggcaatcattgacttgccaattaaa
accaatttccgggaaggcttaacggtcacggaatatattatttcgtcctatggggcacgc
aaaggcttagtagatacggcgttgcgtactgctgactccggatatcttacccgtcgtctg
gtggacgtttcccaggatgtaattattcgagaaaccgactgtggcacgaccagaggtgtg
gtgacgcaggccatgaaagatggcgatcgggttttaatcccgctcagagatcggttgttt
ggtcgcaccgctgccattgatgtgactgatcccaagaccggtgaggtgattgtagcggca
ggtcaatgtttctcggaagaactttcgatcgccgtagaaaaatctggtgtgaaattagtt
aaggtgcgatcggcgctgacctgtgaatcaacccgatcggtctgtcaaacctgttatggt
tggagccttgcccatgccaaaatcgtggacatcggcgaagcggttggaatcattgccgcc
cagtcgatcggtgaacctggtacccagctaaccatgcgtactttccacaccggtggtgta
tttaccggcgagatcgcccagcaaagccgcgctaaatttgtcggctcgatcaaattttct
aagaatttacgcttgcggccgattcgcacccgccatggtgatgatgcctatattgttgag
gctccaggcgaatttatgctggaaagtaaggaaggacgcaagaaatcctacagcgtgacc
cagggttctaccttgctagttcaagatggtcagcaagttgaaaaagatcaactaatggct
gaagtcgcaatttctggccgcaccaaaaagagtaccgaaaaggccaaaaaagagctaaaa
actaacctctctggggaagccctcttctctggcctagtaccagaagaaaagaaagatcgc
cagggtaacaccagctatattgctactcgcagcggcttaatttggattctgggtggtcag
gtgtataacttgctgcccggtgccgacccagtggtcaaaaatggcgatcgggttgagatt
gatgacgtgttggcggtaaccgaattggtaaccgaacatggtggcgtagttaggctcaaa
gacgaagacgcacgccataaccgcgaagtggaaatcatcaccgcctcggtggtactcgat
cgggctaaggttgaagaagaagtcagccaaagtcgagagcattacatcctgcatactgcc
agtggccagcggttcttgctcaaggcagcaccaggcactaaggtcaccagtaaccaggtt
gtggccgagctaatcgatgatacctaccacaccaacagcggtggcattattaaatactct
ggcgatcttgaagttgccaaacgcagcaaagctaaacagggttttgaagtgctcaagggc
ggcaccctactttggattcctgaagaagcccatgaggtaaataaggatatttccctgttg
ctggtcgaagatggtcaatatctggaagctggtaccgaagtggtcaaagacatcttctgt
cagagttctggtgtagttgaggtgacccagaaaaatgacattttgcgcgagattgtgatc
aagccgggcgatctgcacctggtggatgatccccaatcggcgctgaagaaaaatgaaacc
ctggctcagcctggcaccgaaatcttacctggcctagccagtgaagagctgcgctatgtt
gagtatgtcgaaaccccagaagggccagcaatcctattgcgaccggttcaggaattttca
gtacccgacaagccatcgatccccagccaggattcgatctctgagatcagttcaattcgg
ctcagagcagtgcagcggattccctataaagacggcgagcgcgtcaagtcgatcagtggc
ctagagttgctgcgtacccaactgctattggagatcgacactgaagcgccacagattgcc
gctgatattgagtttgtggccgatgaagaagacccagaactattgcgattgcaactggtt
attctagagtctttgatcatccgtcaggatacagcatccgacccaacccagaccaatact
cgcaccaggattttagtagaagaggcgcaacaaattgccccaggtgaagttgtggctcgt
accgagatcctttgtaagcagtctggcgaaatacgcgggatcaaagagggagcagagtta
gtcaggcggattctggtggttacggaagaagatcggatcagtattccttgcgctgatcca
caagtagcggtgggtgatctgctgcggatcggtgactccgtgggcagtaatacgatcgcg
tctgaatccggtcaggttagagcgatcgagaatggcgaagtgatcgtacggatcggtcgc
ccatatttgatctcgcccggcgcagtgctgcaaattgataatgctgatctagtgcaacgc
ggtgatattctcgccttcctggtatttgaacgcgctaaaaccggtgatattatccagggt
ctaccccgaattgaagaattgttagaagcacgcaaacccaaggaaatgtgtgtgttggcg
caaagagccggcacggttcaggttacctactttgaggatgacaactttgagttgaagatc
cttgaagcggatggcaccttgaccgaatattcgatcaatccaggacagagcttaattgtg
tccgatggccagcagctagatgcagccgaaccccttaccgatgggccttcaaatccccat
gacattcttgatattttctttaatatccataaagaaaaagttgggattaaagaagccgct
ttaattagtttgcaaaaggtgcaggaattcctcgtcaatgaagtacaaacggtttatcaa
tctcaaggggttgatatttccgacaaacacattgaagtggtggtcaagcaaatgacctcc
aaagtgcggattgatgatggcggagataccaccagattgccgggtgagttggttgacctg
catcaggttgaacaaatcaacgaagcgatggaaattactggcggtgcgcccgctgaatat
acgcctgtgttgatggggattactaaagctagcttgaatacagatagctttatctcggcg
gccagcttccaggaaaccaccagggtactaaccgaagcggcgatcgaaggtaagtctgat
tggttgcgcggtctgaaggaaaacgtgatcattggtcgcttgattccggcaggcacaggc
tttaatgcctatgacaatatgtctttggatattgatgattcctacgaatcaatccctgac
tttgatgaaagtaccgatgatgtaatcattgatgacaacacggcgcgcaactatcgaatt
gaaggggttggctttactcaggatctgcccaatcgtgacaatgtgcgtgatgtaatttcc
agcagtagcgaggaattgatctccgatcaatctcaggctaatgaattggtcaatagcggc
gcagatatgctaattggggatgatgttaaagacctggttggtggtgaaggcctagtgggc
aatgtgggcggtaagcccagctatcctgggatcgcaccgcaagccaacctagccgatgag
ctagttgatgatcacaccacgattggtaacaatcctgatgccccgcccagcgccccacct
agcataagtgcagctccaaacgaattggggactgagcctggaaccatcgaggatatgcct
gaataa
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