Pseudanabaena sp. PCC 7367: Pse7367_1891
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Entry
Pse7367_1891 CDS
T02369
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
pseu
Pseudanabaena sp. PCC 7367
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseu03021
]
Pse7367_1891
Transcription machinery [BR:
pseu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pse7367_1891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_3
Trp_repressor
HTH_Crp_2
SpoIIID
Sigma70_ECF
HTH_38
HTH_31
HTH_23
LacI
MarR_2
KORA
HTH_Tnp_ISL3
TnsD
HTH_37
HTH_24
HTH_11
HTH_10
Cro
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AFY70167
UniProt:
K9SHS5
LinkDB
All DBs
Position
complement(2377657..2378535)
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AA seq
292 aa
AA seq
DB search
MIASIEKTIDKANKPLQFSVAKNTLAHRQIVNQIGVRKEFSREDKSVTLELLKAYKRSPS
KRIRTKLVNLNIGLVKKEVGYWSNQSAESYEDLLQVGSIGLIGAIERFELNRGYAFSSFA
TRYIRGEIQHYLRDKSSTLRIPRRWMDLHNKSIRAAQQLRRELRREPSDRELAAALEVSL
SEWQDIKLAHQNRSPVSLDAPIRCDEANGTCLAELVPDPKHCLQVSQEDSIRLHQALGQL
EERTRAIVEFVFLQDLTQREVAKMMGVSAVTISRQLKKGLESLKQVMQQQAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgattgccagtattgaaaaaacaattgacaaagcaaacaaaccgcttcaattcagcgtt
gctaaaaataccctggctcaccggcaaatcgttaatcaaatcggtgtcaggaaagaattt
tcccgcgaagacaagagtgtgaccctggaattgctcaaggcctacaagcgatcgccatca
aaacgcattcgtaccaaactggtcaacttgaatattggcctggtcaaaaaagaggtcggc
tattggtctaaccagagcgctgagtcctacgaagatttgctgcaggttggttcgattggt
ttgatcggcgcgatcgaacgatttgaactcaatcgcggctatgcattcagttcctttgcc
actcggtacattcgtggtgaaatccagcattatctgcgtgacaaaagttctactttgcgg
attccccgtcgctggatggatctgcacaataaatcaatccgagccgctcagcaattgcgc
cgcgagttgcgccgggaaccctccgatcgggaattggcggcggctctagaagtttctcta
tcagagtggcaggacatcaagctagcccatcaaaaccgcagtccggtcagccttgatgca
ccgatcagatgcgatgaagccaatggtacttgcttagccgaattggtacccgatcctaag
cattgcttgcaagtgagccaggaagacagcattcgtttgcatcaagccttggggcagcta
gaagaacgcaccagagcgatcgtggagtttgtatttttgcaagacctgacccaacgcgag
gtagcgaaaatgatgggggtgagtgcagtaacgatctcacgccaactcaaaaaggggtta
gaaagcctgaagcaggtgatgcaacaacaggctgcctag
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