Thalassoporum mexicanum: Pse7367_2394
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Entry
Pse7367_2394 CDS
T02369
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pseu
Thalassoporum mexicanum
Pathway
pseu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pse7367_2394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseu03019
]
Pse7367_2394
03110 Chaperones and folding catalysts [BR:
pseu03110
]
Pse7367_2394
03029 Mitochondrial biogenesis [BR:
pseu03029
]
Pse7367_2394
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pseu04147
]
Pse7367_2394
Enzymes [BR:
pseu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pse7367_2394
Messenger RNA biogenesis [BR:
pseu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pse7367_2394
Chaperones and folding catalysts [BR:
pseu03110
]
Heat shock proteins
HSP60 / Chaperonin
Pse7367_2394
Mitochondrial biogenesis [BR:
pseu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pse7367_2394
Exosome [BR:
pseu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pse7367_2394
Exosomal proteins of other body fluids (saliva and urine)
Pse7367_2394
Exosomal proteins of breast cancer cells
Pse7367_2394
Exosomal proteins of colorectal cancer cells
Pse7367_2394
Exosomal proteins of bladder cancer cells
Pse7367_2394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFY70655
LinkDB
All DBs
Position
3028662..3030326
Genome browser
AA seq
554 aa
AA seq
DB search
MAKQVVFDEESRRALERGVNAIANAVRVTLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIE
LEDHLENTGAQLIREVASKTNDVVGDGTTTATVLAQSMIREGLKNVAAGANPISLRRGME
KAVEKLTKLIADRAQPVDAGSGITQVATISSGNDNEVGEMISAAMDKVGQDGVITVEESK
SMVTELETVEGMQFDRGYISPYFVTDPERMLVELENAKLLITDKKIALIQDLVPILEKVA
RSGAPLLVIAEDIEGEALATLVVNKLRGALNISAVKAPGFGERRKAMLEDIAVLTGAQVI
SEDMGLTVDAATLEMLGTARKVTISKDKTTIVAEGNKADIDARVAQIRKQLAETDSDYDS
EKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGSTLVHL
LKQADEVTAGLTAEEKTGAEIVLRSLEDPLRQIGVNAGLEGSVIVEKVKEMDINMGFDAF
ESTYVDMLASGIIDPAKVVRSAIQNAASIAGMVLTTEALVVEKPEKKSAAPADAGMGGMG
GMGGMGGMGGMGMM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaagtcgtatttgatgaagaatccagacgcgcgctggaacgtggtgtaaat
gcgatcgctaatgcggtcagagttacgcttggccccaagggtcgtaatgtggtgctagag
aaaaaatatggcgcaccccagattgtgaatgatggggtcacgatcgccaaggaaatcgag
ctagaagatcacctcgaaaacactggcgctcaattaatccgtgaagtggcctccaaaacc
aatgatgtggtaggtgatggtacgaccacggcgaccgtattggcacagtccatgattcgt
gaggggctgaagaatgtggccgctggtgctaatcccatcagcctgcgtcgcggcatggaa
aaagcggtcgaaaagctaaccaagctaattgccgatcgcgctcagccggttgatgctggt
tctggtattacccaggtagccaccatttcttccggtaatgataacgaagtgggcgaaatg
atctccgccgccatggataaagttggccaggatggcgtaattaccgttgaagaatccaag
tcaatggtgaccgagctggaaaccgtagaagggatgcagttcgatcgtggctatatttcc
ccctattttgtcaccgatccagaacggatgctggtggaattggaaaatgccaagctttta
atcaccgataaaaaaattgctctgattcaagatctagtgccgatcctggaaaaggttgcc
cgttctggcgctcctttgcttgtgatcgccgaagacattgaaggtgaagccctagctacc
ctggtggtcaacaagctgcgtggtgcattgaatatttccgccgtgaaagcgccaggattt
ggtgagcgtcgtaaggccatgctcgaagatatcgcggtgctaactggtgcccaggtgatt
tccgaagatatggggctaaccgttgatgcggccaccctggaaatgcttggcactgctcgc
aaggtaacgatcagcaaggacaaaaccacgatcgtggccgaaggtaataaggccgacatt
gatgcccgtgtggctcagattcgcaagcaattggcggaaactgattcggactatgattcc
gaaaagctgcaagagcggattgctaagctagctggtggtgtagctgtaattaaggttggt
gcggccaccgaaaccgaactaaaggatcgcaagctgcggatcgaggatgccctcaatgca
actcgcgctgctgtcgaagaagggattgtgcctggtggtggttctaccctggtgcatttg
ctcaagcaggcggatgaagtgacggctggtttgaccgctgaggaaaaaactggagccgag
attgtacttcgatccctcgaagatccgctgcgtcaaattggcgtaaatgctggcctggaa
ggtagcgtgatcgttgagaaggtcaaagagatggacatcaacatgggctttgatgcgttc
gagtccacctatgtggatatgctcgccagtggcatcattgacccggctaaggtagttaga
tcggcgatccagaatgctgcttcgatcgctggtatggtcttgaccactgaagctttggtg
gttgagaagcctgagaagaaatccgctgctcctgctgatgctggcatgggtggcatgggc
ggcatgggtggtatgggcggcatgggtggcatgggcatgatgtag
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