Thalassoporum mexicanum: Pse7367_3056
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Entry
Pse7367_3056 CDS
T02369
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pseu
Thalassoporum mexicanum
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseu03016
]
Pse7367_3056
Enzymes [BR:
pseu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Pse7367_3056
Transfer RNA biogenesis [BR:
pseu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pse7367_3056
Prokaryotic type
Pse7367_3056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF7415
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AFY71305
LinkDB
All DBs
Position
complement(3829620..3830468)
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AA seq
282 aa
AA seq
DB search
MAVESANMPKPKQRIALKIQYLGNGYNGWQRQTNEPSVQETIENLLTQVCGDKIVLHAAG
RTDTGVHAAAQVAHFDTSSPIPAHKWAKVLSDRLPENILVRESVAVSPSWHARFSASWRR
YRYVIYTAKLPNLFIQDYSWHFYRDRLDRDLIQQALAPMIGEQDLAAFQRAGSKRAHSRL
NVHEAICWRDQDFIYIEVQASGFLYGMMRLLVGTLVDVGRSRLSVAEFTNIWQKRQRSAI
KYAAPPQGLCLLQIGYPDNPFMATATEAIGDPNQRQMYLVPG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggaaagcgcaaatatgcccaagcctaagcagcggatcgccctaaaaatccag
tatctaggtaatggttacaatggttggcaacgccagactaatgaacctagtgtgcaggaa
acgatcgaaaatctgctaactcaggtttgtggtgacaaaattgtgcttcatgccgctggc
cgcactgataccggagttcatgccgccgcccaggtagcccattttgacaccagcagccca
attccagcccataagtgggctaaggttttgagcgatcgattgcctgaaaacatcctggtg
cgcgaatcggtggcagttagtcccagttggcatgcgcgattctcagctagttggcgacgt
taccgctatgtaatctatacggcgaaattgcccaatctgtttattcaggactatagctgg
catttctaccgcgatcggctcgatcgggatttaatccagcaggctctagcaccaatgatt
ggtgagcaagacttagccgcctttcaaagggcaggttctaagcgagcccactcccgcctc
aatgttcatgaagcaatttgctggcgcgaccaagattttatttacatcgaagtgcaggca
agtggctttttatatggtatgatgcgtcttctggtgggtactttggtagatgttgggcga
tcgcgtttgagcgttgctgaatttaccaatatctggcaaaagcggcagcgcagcgccatt
aagtatgcagctccaccacaaggtctttgtttgctgcagattggctatccagacaaccca
ttcatggcaaccgcaactgaggcgatcggtgatcctaatcagcgtcagatgtatctggtg
ccaggatga
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