Thalassoporum mexicanum: Pse7367_3407
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Entry
Pse7367_3407 CDS
T02369
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseu
Thalassoporum mexicanum
Pathway
pseu03420
Nucleotide excision repair
pseu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pse7367_3407
03430 Mismatch repair
Pse7367_3407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseu03400
]
Pse7367_3407
Enzymes [BR:
pseu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pse7367_3407
DNA repair and recombination proteins [BR:
pseu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pse7367_3407
MMR (mismatch excision repair)
Other MMR factors
Pse7367_3407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
Baseplate_wedge
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFY71644
UniProt:
K9SPA8
LinkDB
All DBs
Position
complement(4265222..4267621)
Genome browser
AA seq
799 aa
AA seq
DB search
MNAQFLNHLNPAQKKAASHTQGPLLVVAGAGSGKTRTLTYRIANLLLNHNVAPESILAVT
FTNKAAREMGDRISNLLMQELALVEYGKPLDNLVEVDRKRLASKIRRINSYATDGLWVGT
FHSMCCRILRLDIDKYTSENGHKWQTNFSIFDESDAQSLVKDIVTNRLNLDEKRFEPRSV
RFAISNAKNQGWTPQQYQQNESGFKARQIALVYETYQTQLAANNALDFDDLIFLPVKLFR
QSPETLAYWHDRFKHILVDEYQDTNRTQYELIRLLATGNLRSGQDFDWQGRSVFTVGDAD
QSIYRFRGADFTILMEFQETFGDRLADAKTKTMIKLEENYRSVANILSAANQLIENNSER
IDKVLRPTRNDGDLIHLYRGDTEIDEAAYVVQQIRAIKAQIPNANWGHFAILYRTNAQSR
VLEGEMLDIPYKIVGGFRFYDRKEIKDILAYLRLLSNPADTISLLRVINTPKRGIGASTI
AKLTDAARELGIPLWEILGDETSVKTITGRAAKKVIGFMELINKWIGQAQGMSAAEIIQG
IVSESGYEQELQAQGNDEATERLANLNELYNAALQYAEESGDPSLDAFLASAALASSLDN
ADEDAEKVTLMTLHSAKGLEFPVVFLVGLEQGLFPSYRSLNDPMALEEERRLMYVGITRA
QEKLILTHAQARRLYGNREYAIASQFLDELPKDLLSGQSAERYGSSAYASSGSSSESAGA
GRRLTIADKLRNKSRTKDVVKPRMAIADWQVGDRLMHDEFGEGKVTNLLGSGEKMYVAVS
FEGRGKKILDPRLAPMQKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccagtttttaaatcacctcaaccctgcccagaaaaaagccgctagccatacc
cagggtcctctgctggtagtggctggagccggatcgggcaaaacgcgcaccctcacctat
cgaattgccaacctgttgcttaaccacaatgttgccccagagagcattttggcggttacc
ttcaccaacaaagccgcaagggagatgggcgatcgcatttctaatctgttgatgcaagag
ttggccttagttgagtatggcaagccgctagataatctggtggaagtcgatcgtaagcgc
ctagcttccaaaatccggcgtattaatagctatgccaccgatgggctgtgggtgggtact
ttccacagtatgtgttgtcggatcttgcggctggatatagataaatacaccagtgagaat
ggccacaagtggcagaccaatttttcgatctttgatgagtccgatgcccagtctttggtt
aaggacattgtgaccaatcggctgaatctggatgaaaaacggtttgagccgcgatcggtg
cggtttgcaatcagcaacgctaaaaatcaaggctggacaccgcaacaatatcaacaaaac
gagtctggcttcaaagcgcgtcagatcgccctggtctatgaaacctatcaaactcaactg
gcggctaataatgccctggattttgatgatttgattttcttgccagtaaaactattccgc
cagagcccagaaactttggcctattggcacgatcgctttaagcatattctggtggacgaa
tatcaagataccaaccgcactcagtatgagctaattcggctgttggcaacgggcaacctc
aggtctggccaggattttgactggcaggggcgatcggtgtttacggtgggtgatgccgat
cagagcatctatcgatttcgcggtgctgattttacaatcctgatggaattccaggaaacc
tttggcgatcgcctggctgatgctaagaccaagaccatgattaagctggaggaaaactat
cgatcggtggcgaatattctcagtgccgccaatcaattgattgaaaacaacagcgagcgg
atcgataaggtcttgcgccctacccgcaacgatggtgatctgatccacctctatcggggg
gatacggagatcgacgaagcggcctatgtggtacagcagattcgcgcgattaaagcccaa
atccccaacgccaattggggacattttgcgattttgtatcgtactaatgcccaatcacgg
gtattggaaggggagatgctggatatcccctacaagatcgtgggtgggtttcggttctac
gatcgcaaagagatcaaagacatcctggcctatttgcgtttgctgtctaatcccgccgat
acgattagtttgctgcgggtgattaatacgcccaagcgagggatcggcgcatccacgatc
gcaaagctcaccgatgccgcccgggagttgggtatcccactgtgggaaattctcggcgat
gaaacctcagtcaaaacaattacgggtagggcagccaagaaagtaattggttttatggag
ctaatcaacaaatggatcggtcaggctcagggcatgtcagcggcagaaattatccaaggg
attgtatctgagtcgggctatgaacaggaactacaagcccagggtaacgacgaggccaca
gagcgattggccaacctgaatgagctatataacgcagcattgcaatatgcggaagaaagt
ggcgatccctctttggatgcattcctggccagtgccgcccttgcttctagtttggacaat
gccgatgaggatgctgaaaaagtcaccctgatgacgttgcattccgccaaggggttagaa
tttccggtggtgtttttagttggcctggagcagggactatttcccagctatcgatcgctg
aatgacccaatggcactggaagaagaacgccgcttgatgtatgtgggtattacccgcgcc
caggaaaaattgatcctcacccatgcccaggccaggcggctctatggcaatcgggaatat
gcaatcgcctcacagttcctggatgaattacccaaggatttactcagtggtcaatcggcg
gagcgctatggcagcagcgcctatgctagttctggtagtagtagtgaatcggcgggggcg
ggtcgccgcttgacgatcgctgacaaacttagaaataaatctcggactaaggatgtggtg
aagccacgcatggcgatcgcggattggcaggtgggcgatcggttgatgcatgatgagttt
ggcgagggcaaggtgacgaatctgctgggatcgggcgaaaaaatgtatgtggcggttagt
tttgaggggaggggcaaaaaaattctcgatcctcgcttagcaccaatgcagaagttataa
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