Pseudoclavibacter triregionum: USB125703_00335
Help
Entry
USB125703_00335 CDS
T07344
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev00260
Glycine, serine and threonine metabolism
psev00630
Glyoxylate and dicarboxylate metabolism
psev00670
One carbon pool by folate
psev00680
Methane metabolism
psev01100
Metabolic pathways
psev01110
Biosynthesis of secondary metabolites
psev01120
Microbial metabolism in diverse environments
psev01200
Carbon metabolism
psev01230
Biosynthesis of amino acids
psev01240
Biosynthesis of cofactors
psev04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
USB125703_00335 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
USB125703_00335 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
USB125703_00335 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
USB125703_00335 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
USB125703_00335 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
USB125703_00335 (glyA1)
Enzymes [BR:
psev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
USB125703_00335 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
DUF8101
Motif
Other DBs
NCBI-ProteinID:
CAG7844112
LinkDB
All DBs
Position
1:complement(377839..379122)
Genome browser
AA seq
427 aa
AA seq
DB search
MTDATSAFSQPLAELDPEISAVLDKELARQRTTLEMIASENFVPRAVLEAVGSVLTNKYA
EGYPGRRYYGGCEEVDIAEHLAIERAKALFGAEYANVQPHSGASANAAVLHAIARPGDTI
LGLSLDHGGHLTHGMKINFSGRLYDIVAYGVDAETSEIDMGEVRRLAVEHQPKVIIAGWS
AYPRQLDFAKFREIADEVGALLWVDMAHFAGLVAAGLHPNPVPHAHVVSSTVHKTIGGPR
SGFILTNDADIAKKLNTAVFPGQQGGPLMHVIAAKAVAFKLAATPEFKDRQERTLSGAQI
LADRLMQDDVKQAGITIRSNGTDVHLVLVDLRDAAIDGKQAEDLLHEVGITVNRNTVPND
PRPPMVTSGLRIGTPALATRGFGDAEFREVSDIIALALQPNPDVEALRARTKALADAFPL
YEGLEQW
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgccacgtccgccttcagccagcccctcgcggagctcgaccccgagatctcg
gcggtcctcgacaaggagctcgcgcgccagcgcacgacgctcgagatgatcgcctccgag
aacttcgtcccgcgcgccgtgctcgaggccgtcggctcggtcctcacgaacaagtacgcc
gagggctacccgggccgccgctactacggcggctgcgaggaggtcgacatcgccgagcac
ctcgccatcgagcgcgcgaaggcgctcttcggcgccgagtacgcgaacgtccagccccac
tcgggcgcctcggcgaacgcggccgtcctccacgccatcgcgcgcccgggcgacaccatc
ctcggcctctcgctcgaccacggcggccacctcacgcacggcatgaagatcaacttctcg
ggccgcctctacgacatcgtcgcctacggcgtcgacgccgagacctccgagatcgacatg
ggtgaggtccgccgcctcgccgtcgagcaccagccgaaggtcatcatcgccggctggtcg
gcgtacccccgccagctcgacttcgcgaagttccgcgagatcgccgacgaggtcggcgcg
ctcctctgggtcgacatggcgcacttcgcgggcctcgtcgccgcgggcctccacccgaac
cccgtgccgcacgcgcacgtcgtctcctcgaccgtccacaagacgatcggcggcccccgc
tcgggcttcatcctcaccaacgacgccgacatcgcgaagaagctcaacacggccgtcttc
ccgggccagcagggcggcccgctcatgcacgtcatcgccgcgaaggccgtcgccttcaag
ctcgccgcgacgcccgagttcaaggaccgccaggagcgcacgctctcgggcgcgcagatt
ctcgccgaccgcctcatgcaggacgacgtgaagcaggccggcatcaccatccgctcgaac
ggcaccgacgtgcacctcgtgctcgtcgacctccgcgacgcggcgatcgacggcaagcag
gccgaggacctcctccacgaggtcggcatcaccgtgaatcgcaacacggtgccgaacgac
ccgcgcccgccgatggtcacctcgggcctccgcatcggcacgccggcgctcgcgacgcgc
ggcttcggcgacgccgagttccgcgaggtctcggacatcatcgcccttgccctccagccg
aacccggacgtcgaggcgctccgcgcccgcacgaaggcgctcgcggacgcgttcccgctc
tacgagggcctcgagcagtggtag
DBGET
integrated database retrieval system
