Pseudoclavibacter triregionum: USB125703_00354
Help
Entry
USB125703_00354 CDS
T07344
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03420
Nucleotide excision repair
psev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
USB125703_00354 (uvrD1)
03430 Mismatch repair
USB125703_00354 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00354 (uvrD1)
Enzymes [BR:
psev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
USB125703_00354 (uvrD1)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
USB125703_00354 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
USB125703_00354 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_22
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAG7844131
LinkDB
All DBs
Position
1:complement(406035..408503)
Genome browser
AA seq
822 aa
AA seq
DB search
MTLLPPLSGSPGFDALLEGLNPQQREAVEHRGPALLIVAGAGSGKTRVLTHRIASLIASR
EAWPSQILAITFTNKAAAEMRERVEQLLGQAAEGMWISTFHSACVRILRREAERFGYGSG
FTIYDSADSRALLKRIVKALEADMLGFTPASAQSRISKLKNELVDVEGFSRQVSSGDPRD
LMLLEIYRQYQRELERAHAFDFDDLIGQTVWLFRAHPEVAAQYQRRFRHVLVDEYQDTNH
AQYSLIRELTRPVAPEHVPADTRMELDANGGIPGASLTVVGDSDQSIYAFRGADIRNITE
FEQDYPQAKVVLLEQNYRSTQNILSAANAVISNNFDRMAKNLWSASGDGDKIVGFAGYSA
HDEAQFVADEIHALHDEGLRFSDMAVFFRTNAQTRALEEILIRSAVPYRIVGGTKFYERA
EIKDVMAYLLAVANPADELALRRILNTPKRGIGPMSETAIWDFAQRNGITFREAMRRADE
LALGPKVTKAILELAGLLDRASESTDPSRPTGAATVGELLTVLLRETKYVEKLYETGNPQ
DEARAENVEELVSVAKEYDKQHPDGTLVDFLTETALVAAADDLDDESGAVALMTLHTAKG
LEYDAVFLTGIEEELLPHRMSAGEPGGEAEERRLFYVGITRARKRLFLSLAMMRATFGET
SPSLPSRFLQEIPNELIDWRQEPGDAAGFGFGRSVGSGRRELGGGSGLDGGGSYGGYGRA
TREPAGEPGYSVRFKDPEAGRELGRTAASERPKRKWANEITGQVRDNSGMVLERGDRIRH
VDFGEGTVRAMLGSETKRIAEVDFDTAGRKKLLVNLAPIEKL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcctgcccccgctctccggttcgcccggcttcgacgccctcctcgagggcctc
aacccgcagcagcgcgaggccgtcgagcaccgcggccccgcgctcctcatcgtcgccggc
gcgggctccggcaagacgcgcgtgctcacgcaccggatcgcctcgctcatcgcgagccgc
gaggcgtggccgagccagatcctcgcgatcaccttcacgaacaaggccgccgccgagatg
cgcgagcgcgtcgagcagctcctcggccaggcagccgagggcatgtggatctcgaccttc
cacagcgcgtgcgtgcgcatcctccgccgcgaggccgagcgcttcggctacggctcgggc
ttcacgatctacgactccgccgactcgcgcgccctgctcaagcgcatcgtcaaggcgctc
gaggccgacatgctcggcttcacccccgcgagcgcgcagtcgcgcatctcgaagctcaag
aacgagctcgtcgacgtcgagggcttctctcggcaggtgtcgtccggcgacccgcgcgac
ctcatgctcctcgagatctaccggcagtaccagcgcgagctcgagcgggcgcacgccttc
gacttcgacgacctcatcgggcagacggtgtggctcttccgcgcgcacccggaggtcgcc
gcgcagtaccagcgccgcttccggcacgtgctcgtcgacgagtaccaggacacgaaccac
gcccagtactcgctcatccgagagctcacccgccccgtcgcgcccgagcacgtgccggcc
gacacccgcatggagctcgacgcgaacggcggcatcccgggcgcctcgctcaccgtcgtc
ggcgactccgaccagtcgatctacgccttccgcggcgccgacatccgcaacatcaccgag
ttcgagcaggactacccgcaggcgaaggtcgtgctcctcgagcagaactaccgctcgacg
cagaacatcctctccgccgcgaacgccgtcatctcgaacaacttcgaccggatggcgaag
aacctctggtcggcctccggcgacggcgacaagatcgtcggcttcgcgggctactcggcg
cacgacgaggcgcagttcgtcgccgacgagatccacgcgctccacgacgaggggctccgc
ttctcggacatggcggtgttcttccgcacgaacgcgcagacgcgcgcgctcgaggagatc
ctcatccgctccgccgttccctatcggatcgtcggcggcacgaagttctacgagcgcgcc
gagatcaaggacgtcatggcgtacctcctcgcggtcgcgaacccggcggacgagctcgcg
ctgcggcgcatcctcaacaccccgaagcgcggcatcgggcccatgagcgagaccgcgatc
tgggacttcgcgcagcgcaacgggatcaccttccgcgaggcgatgcgccgcgccgacgag
ctcgcgctcgggccgaaggtgacgaaggcgatcctcgagctcgccggcctgctcgaccgg
gcctccgagtcgacggacccgagccggccgaccggcgccgcgacggtgggggagctcctc
accgtgctcctgcgcgagacgaagtacgtcgagaagctctacgagaccggcaacccgcag
gacgaggcccgcgccgagaacgtcgaggagctcgtctcggtcgcgaaggagtacgacaag
cagcaccccgacggcacgctcgtcgacttcctcaccgagaccgcgctcgtcgcggccgcc
gacgacctggatgacgagtcgggcgccgtcgcgctcatgacgctccacacggcgaagggc
ctcgagtacgacgccgtcttcctcacgggcatcgaggaggagctcctcccgcaccgcatg
agcgcgggggagcccggcggcgaggccgaggagcggcgcctcttctacgtcggcatcacg
cgcgccaggaagcggctcttcctctcgctcgcgatgatgcgcgcgaccttcggggagacg
agcccctcgctgccgagccggttcctgcaggagatcccgaacgagctcatcgactggcgg
caggagccgggggacgccgcgggcttcggcttcgggcgctcggtcggctccggtcggcgt
gagctcggcggcggctcgggcctcgacggaggcggcagctacggcggctacggccgcgcg
acgcgcgagcccgcgggggagcccggctattcggtgcgcttcaaggacccggaggccggc
cgcgagctcggccgcacggcggcgagcgagcggccgaagaggaagtgggcgaacgagatc
accggccaggtgcgcgacaactcgggcatggtgctcgagcgcggcgaccgcatccgccac
gtcgacttcggcgaggggacggtccgggccatgctcggcagcgagacgaagcgcatcgcc
gaggtcgacttcgacaccgccggccgcaagaagctcctcgtgaacctcgcgccgatcgag
aagctgtag
DBGET
integrated database retrieval system
