Pseudoclavibacter triregionum: USB125703_00395
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Entry
USB125703_00395 CDS
T07344
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
USB125703_00395 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psev03021
]
USB125703_00395 (rpoA)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00395 (rpoA)
Enzymes [BR:
psev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
USB125703_00395 (rpoA)
Transcription machinery [BR:
psev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
USB125703_00395 (rpoA)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
USB125703_00395 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
CAG7844170
LinkDB
All DBs
Position
1:complement(447073..448068)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEENISEYRSRFIIEPLEPGFGYTLGNSMRRTLLSSIPGAAVTSVRIDGVL
HEFSTIPGVKEDVTEVILNIKQLVVSSEHDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PDLVIATLNDDAKFELELTIERGRGYVSAVQNRNEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAVASAGRTLVELFSLARELNEQAEGIEIGPAPVD
AVLTNELSIPIEDLDLSVRSYNCLKREGINTVAELVALSETQLMNIRNFGQKSVDEVRDK
LTEMGLSLKDSVPGFEGAHFYGAGDDSGEYI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgccccacgctcaccgaagagaacatctcggagtaccgttcgcgg
ttcatcatcgagcccctcgagccgggcttcgggtacacgctcggaaactcgatgcggcgc
acgctgctctcgtccatcccgggcgcggcggtcacgagcgtccggatcgacggcgtgctt
cacgagttctcgacgatcccgggcgtgaaggaagacgtcaccgaggtcatcctcaacatc
aagcagctcgtcgtctcgagcgagcacgacgagccgatcaccgcgtacctccgcaagacg
ggcgcgggcgaggtcacggccgccgacatctccgctccggcgggcgtcgaggtccacaac
ccggatctcgtcatcgccacgctcaacgacgacgcgaagttcgagctcgagctcacgatc
gagcgcggccgcggctacgtctcggccgtccagaaccgcaacgagttctcggaggccggc
cagatcccggtcgactcgatctactcgcccgtcctcaaggtgacgtaccgcgtcgaggcc
acccgcgccggcgagcgcaccgacttcgaccgcctcgtcgtggacgtcgagacgaagccg
gcgatctcgccgcgcgacgccgtcgcctccgccggccgcacgctcgtcgagctcttctcg
ctcgcgcgcgagctcaacgagcaggccgagggcatcgagatcggcccggccccggtcgac
gccgtcctcacgaacgagctctcgatcccgatcgaggacctcgacctctcggtccgctcg
tacaactgcctcaagcgcgaggggatcaacacggtcgccgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggccagaagtcggtcgacgaggtgcgcgacaag
ctcacggagatgggcctctcgctcaaggactcggtccccgggttcgagggcgcgcacttc
tacggcgccggcgacgacagcggcgagtacatctaa
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