Pseudoclavibacter triregionum: USB125703_00479 Help Entry USB125703_00479   CDS       T07344                                  Symbol rhlE_2 Name (GenBank) ATP-dependent RNA helicase RhlE   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism psev  Pseudoclavibacter triregionum Brite KEGG Orthology (KO) [BR:psev00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psev03400]     USB125703_00479 (rhlE_2) Enzymes [BR:psev01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      USB125703_00479 (rhlE_2)     5.6.2.6  RNA 3'-5' helicase      USB125703_00479 (rhlE_2) DNA repair and recombination proteins [BR:psev03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     USB125703_00479 (rhlE_2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr WH2_Lhr DEAD Helicase_C ResIII DUF6406 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  CAG7844253 LinkDB All DBs Position 1:524805..530237 Genome browser AA seq 1810 aa AA seqDB search MADALDRFSPATREWFRGAFAAPTRVQEAAWASIAEGRHTLVVAPTGSGKTLAAFLWALD RLASQGASQPPILEPEDLAALESQGLAGEEAQAAAASAPRRRTRVVYLSPLKALGVDVER NLHAPLVGITQTARRLGLEAPRPSVGVRSGDTSAAERRQQLRQPPDILITTPESLFLMLT SQARTTLAGVETVILDEVHAVAGSKRGAHLALTLERLDALLERPAQRIGLSATVRPLEEV ARFLGGGAPVDIVAPPSEKAFDLRVVVPVEDMSDIGLARAASTGDDPLAPFGDVADGAFD GLEDPGGAADGFGDGIAYGSASRSLRDPGAPPAGSIWPHIEASIVDRVLEHRSTIVFVNS RRLAERLTARLNEIYEERLAQAAEREGGQGASAGDEGDRDPAFAVDDGSIVWGGPARGGA GTDVDDERIPQPGSARRESRPTPSSRPSRPPAEVMAQSGSTKGADPVLARAHHGSVSKEA RAEVEDALKTGRLRCVVATSSLELGIDMGDVELVIQVESPPSVASGLQRLGRAGHQVGVV SKGDIFPKHRADVLHSGVAATRMLSGSIEALRITANPLDVLAQQTIAATAMDELDVEEWF DLVRRAAPFASLPRSVFDATLDLLAGRYPSDAFAELRPRVVWDRDAGTLTARPGAQRLAV TSGGTIPDRGMFGVFLLAGAEGGSDGSAGDGPARPARTGGMRVGELDEEMVYESRVGDVF ALGATSWRIAEITHDRVLVTPAFGEPGKLPFWTGDALGRPAELGEAIGAATRAIVRGMPA QEGPEALKARAIAAGGGDGDSDSDSAGSGSGSGSGAGSSSGGEPSGAGSASDDLGGLASV LDPLARGNLLAYLAEQRASTGHVPDDRTLVVERCRDELGDWRVILHSPYGKPVHSPWALI VNARISERYGVDGGAVASDDGIIVRLPDAEADPPGAELFALEPDEIEPIVAREVGGSALF AARFREAAARALLLPRLHPGKRSPLWQQRQKAAQLLDVAKGFPTFPIILETVREVLHDVY DLDALTELAKRLERREVRLVETATEEPSPFARTMLFGYVGAFMYEGDSPLAERRAAALSL DAGLLAELLGRVELRELLDAGVIERVERELQRLAPGRRARDLEGVADLLRLLGPLSVAEI AARLEGPDDGEAVPVSDASAGVAAGAAGAVPGHPLPNRASAPDIPAADVRIGSEHETGAL EAADSPAPGAPDGPDADAARAAALLPLAEAHVAELVAAKRALRVRIAGEERIAAIEDASR LRDALGVPLPIGVPSAFIEPVADPVGDLVSRYARTHGPFRAAELASRMGLGEAIAREALS RLELARRVVEGEFRPGASGSEWIDQEILRRIRARSLAALRSEVEPVDQPAFARFLASWQH LEPSRGKRPASGELAGVDGLVTAIDQLAGCPVPASALESFILPARVRDYGPWMLDELAAT GELRWVGHGPIPGGDGWVSLHLADTAHLTLPLEPEDPPAEPDALGLRVLDALERGGARFF RELQRELELGDDGPLARAIWELVWQGRVTNDAIAPLRGLLSGGPGGTSGAAHRAPRRAAR GRLYRGRVAMGGEQQGSAAFLPAPPSLAGRWSLAPSGDADAGERAIAAGELLLDRHGVVT RGAVTAEGLPGGFALAYRVLARFEESGRARRGYYVEGLGGAQFATSGTIDRLRSFSRDPG ETPPREAITLAATDPANPYGAALAWPEPPGEETATGHRPGRKAGGLVTLVDGELALYVER GGKTLLAFTDDDAVLGAATESLARTVERARIPNLVIEKANGAYVHTHPIASWLDGAGFQR TPRGFKARTS NT seq 5433 nt NT seq  +upstreamnt  +downstreamnt gtggcggatgcgctcgatcgcttctcccccgcgaccagggaatggttccgcggggccttc gccgcgcccacgcgcgtgcaggaggccgcgtgggcctcgatcgccgagggccggcacacc ctcgtcgtcgccccgaccggctccggcaagacgctcgcggccttcctctgggcgctcgac cggctcgcctcgcagggggcctcgcagccgccgatcctcgagccggaggacctcgccgcg ctcgagtcgcagggcctcgcgggcgaggaggcgcaggccgccgcggcgtccgcaccgcgc cgccgcacgcgcgtcgtctacctctcgccgctcaaggcgctcggcgtcgacgtcgagcgg aacctccacgcgccgctcgtcggcatcacccagaccgcccgccggctgggcctggaggcc ccgcgcccgagcgtcggcgtgcgctcgggcgacacgagcgcggccgagcgtcgccagcag ctgcggcagccgcccgacatcctcatcacgacgcccgagtcgctcttcctcatgctcacc tcgcaggcgcggacgacgctcgcgggcgtggagacggtcatcctcgacgaggtccacgcg gtggccggctcgaagcgcggcgcccacctcgcgctcaccctcgagcggctcgacgccctc ctcgagcggcccgcgcagcgcatcggcctctcggcgaccgtgcgcccgctcgaggaggtc gcccgcttcctcggcggcggcgcgcccgtcgacatcgtcgcgccgccgagcgagaaggcc ttcgacctccgcgtcgtcgtgccggtcgaggacatgtccgacatcgggctcgcccgcgcg gcctcgacgggcgacgacccgctcgcgcccttcggcgacgtcgccgacggtgccttcgac ggcctcgaggatccgggcggtgcggcggacggcttcggcgacgggatcgcgtacggctcg gcgtcccgctccctcagagacccgggcgcgcccccggcggggtcgatctggccgcacatc gaggcctcgatcgtcgaccgcgtgctcgagcaccgctccacgatcgtgttcgtgaactcg cggcgcctcgccgagcggctcacggcgcggctcaacgagatctacgaggagcggctcgcg caggcggcggagcgggagggcggccagggtgcctcggctggggacgagggcgatcgcgat cccgccttcgccgtcgacgacggctcgatcgtgtggggcggcccggcccgcgggggcgcg ggcacggacgtcgacgatgagcgcatcccgcagcccggctcggcccgccgcgagtctcgg cccacgccatcctcgcggccatcccgcccgcccgccgaggtcatggcgcagtccgggtcg acgaagggcgccgaccccgtgctcgcccgcgcccaccacggctccgtctcgaaggaggcg cgcgccgaggtcgaggacgccctcaagaccgggcgcctgcgctgcgtcgtcgcgacctcg agcctcgagctcggcatcgacatgggcgacgtcgagctcgtcatccaggtcgagtcgccg ccctcggtcgcctccggcctgcagcgcctcgggcgcgccggccaccaggtcggcgtcgtc tcgaagggcgacatcttcccgaagcaccgcgccgacgtcctccactcgggcgtcgcggcg acgcgcatgctctcgggctcgatcgaggcgctccgcatcaccgcgaacccgctcgacgtg ctcgcccagcagacgatcgccgcgaccgccatggacgagctcgacgtcgaggagtggttc gacctcgtgcgccgcgcggcgcccttcgcgagcctgccgcgctcggtcttcgacgcgacg ctcgacctgctcgccggccgctacccctcggacgccttcgccgagctgcggccgcgcgtc gtgtgggatcgcgacgcgggcacgctcacggcgcggcccggcgcccagcggctcgcggtg acgagcggcggcacgatcccggatcgcggcatgttcggcgtcttcctcctcgcgggcgcc gagggcgggtcggatggctcggccggcgacggccccgcacggccggcgcgcacgggcggc atgcgggtcggcgagctcgacgaggagatggtctacgagtcgcgcgtcggcgacgtcttc gcgctcggcgcgacgagctggcggatcgccgagatcacccacgaccgcgtgctcgtcacg ccggccttcggcgagcccgggaagctgccgttctggaccggcgacgcgctcggccgcccc gccgagctcggcgaggcgatcggcgcggcgacgcgcgcgatcgtgcgcgggatgccggcg caggaggggccggaggcgctcaaggcgcgggcgatcgcggcgggcgggggcgacggagac agcgacagcgacagcgccggttccggttccggttccggttccggtgccggttccagttcc ggaggcgagccgtccggcgcagggtccgcctccgacgacctcggcggcctggcatccgtc ctcgaccccctcgcgcgcggcaacctcctcgcctacctcgccgagcagcgcgcctcgacc gggcacgtgcccgacgaccgcacgctcgtcgtggagcgctgccgcgacgagctcggcgac tggcgcgtcatcctccactcgccctacggcaagcccgtccactcgccgtgggcgctcatc gtgaacgcccggatctccgagcgctacggcgtcgacggcggcgcggtcgcgagcgacgac ggcatcatcgtgcgcctcccggacgcggaggccgacccgcccggtgccgagctcttcgcc ctcgagcccgacgagatcgagccgatcgtcgcccgcgaggtcggcggctccgcgctcttc gcggcccgcttccgcgaggccgcggcccgggcgctcctgctgccgcggctccacccgggc aagcgatccccgctctggcagcagcggcagaaggccgcgcagctgctcgacgtcgcgaag ggcttcccgaccttcccgatcatcctcgagaccgtccgcgaggtgctccacgacgtctac gacctggatgccctcaccgagctcgccaagcgcctcgagcgccgcgaggtgcggctcgtc gagaccgcgaccgaggagccctcgcccttcgcccgcacgatgctcttcggctacgtcggc gccttcatgtacgagggcgactccccgctcgccgagcgccgcgcggccgccctctcgctg gacgcgggcctgctcgcggagctcctcggccgcgtcgagctgcgggagctcctcgacgcg ggcgtcatcgagcgcgtcgagcgcgagctccagcgcctcgcgcccggccgtcgcgcgcgc gacctcgagggcgtcgccgacctcctgcgcctgctcgggccgctctccgtcgccgagatc gcggcgcgcctcgaggggccggatgacggggaggcggtgcccgtctcggacgcctccgcc ggcgtcgccgcgggtgccgcgggcgccgttccgggccatccgctgccgaatcgagcatcc gctcccgacattccggcagcggacgtccgcatcggcagcgaacacgagacaggagccctc gaggcagccgactcccccgcccccggcgcccccgacggccccgacgccgacgccgcccgc gcagccgccctcctccccctcgccgaggcgcacgtcgccgagctcgtcgccgcgaagcgc gccctccgcgtccgcatcgccggcgaggagcgcatcgccgcgatcgaagacgcctcgcgc ctccgcgacgccctcggcgtccccctccccatcggcgtcccgagcgccttcatcgagccc gtcgccgaccccgtcggcgacctcgtctcccgctacgcccgcacccacggccccttccgc gccgccgagctcgcgagccggatgggcctcggcgaggccatcgcccgcgaggcgctctcc cgcctcgagctcgcccgccgcgtcgtcgagggcgagttccggccgggcgcgagcggctcc gagtggatcgaccaggagatcctccgccgcatccgcgcccgctcgctcgccgcgctccgc agcgaggtcgagcccgtcgaccagcccgccttcgcgcgcttccttgcctcatggcagcac ctcgagccctcgcgcgggaagcgcccggcctcgggagagctcgcgggcgtcgacggcctc gtcacggcgatcgaccagctcgcgggctgccccgtgccggcatccgccctcgagtcgttc atcctgcccgcgcgcgtgcgcgactacggcccgtggatgctcgacgagctcgcggcgacc ggcgagctgcgctgggtcggccacggcccgatccccggcggcgacggctgggtgagcctc cacctcgccgacaccgcgcacctgacgctccccctcgagcccgaggatccgcccgccgag ccggacgcactcggcttgcgcgtgctggacgcgctcgaacgcggcggcgcgagattcttc cgcgagctccagcgcgagctcgagctcggcgacgacgggccgctcgcccgcgcgatctgg gagctcgtctggcagggccgcgtcacgaacgacgccatcgccccgctgcgcgggctcctc tccggcgggcccggcggcacgagcggcgccgcccaccgcgccccgcgccgcgccgcccgc gggcgcctctaccgcggccgcgtcgccatgggcggcgagcagcagggatccgccgccttc ctccccgccccgccgagcctcgccggccgctggtcgctcgcgccgagcggcgacgcggat gccggggagcgcgcaatcgccgccggcgagctcctcctcgaccggcacggcgtcgtcacc cgcggcgcggtcacggccgagggcctccccggcggcttcgcgctcgcctaccgcgtgctc gcccgcttcgaggagtcgggccgcgcccgccgcggctactacgtcgaggggctcggcggg gcgcagttcgccacctcgggcaccatcgaccggctacgatccttctcgcgcgaccccggc gagacgccgccgcgcgaggcgatcacgctcgcggcgaccgaccccgcgaacccctacggc gcggcgctcgcctggcccgagccgcccggcgaggagaccgcgaccggccaccgtcccggg cgcaaggccggcggcctcgtcaccctcgtcgacggcgagctcgccctctacgtcgagcgc ggcggcaagaccctgctcgcgttcacggacgacgacgccgtgctcggggccgcgaccgag tcgctcgcgcgcacggtcgagcgggcgcgcatcccgaacctcgtcatcgagaaggcgaac ggcgcctacgtccacacccatcccatcgcgagctggctcgacggggccggcttccagcgc accccgcgcggattcaaggcgaggacgagctga

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