Pseudoclavibacter triregionum: USB125703_00517
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Entry
USB125703_00517 CDS
T07344
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00517 (radA)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
USB125703_00517 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
AAA
AAA_22
ChlI
AAA_16
Lon_C
ATPase_2
AAA_30
GvpD_P-loop
NTPase_1
CobU
NACHT
nSTAND3
ArsA_ATPase
AAA_5
AAA_14
AAA_19
MeaB
Isochorismatase
IstB_IS21
CbiA
AAA_29
AAA_24
DUF7129
KdpD
TniB
DUF7125
DAP3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAG7844290
LinkDB
All DBs
Position
1:575901..577283
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AA seq
460 aa
AA seq
DB search
MARPREKTPPYVCTECGATSLKWLGQCPECQAWGTVVDRFESRTASRAQPAAIPVGHEAR
PITETPIERVTHRPTGIGELDRVLGGGIVPGAAILFSGEPGVGKSTLLLETASRVASTGA
RVLYVSAEESVSQVRLRAERTNALHPTLFLASETDLATLLGHVEQVDPALLIVDSIQTVA
SSEVDSLAGQPSQVREVASALIRLAKSRNLPVIIVGHVTKDGQVAGPRLLEHLVDVVAHV
EGDRQTALRFARTLKNRFGPTDEVGCFEMTGAGMREVPDPSGLFLSERGTPVSGTCVTVA
LEGRRALPVEIQALVVPTQAPNPRRVTNGVDASRVAMLLAVLERRVGMKLAQCDVYVSTV
GGVKLAEPAADLAIAAAIASAAANRPIRPEAVVFGEVSLAGEIRRVAQAKLRAQEAARVG
FRTAIDTSAGTVSDALREALMPGGASRGPASEAPPAALAE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccccgagagaagacgcccccgtacgtgtgcacggagtgcggcgcgacctcc
ctgaagtggctcggccagtgccccgaatgccaggcctggggcaccgtcgtcgaccgcttc
gagtcacgcaccgcctcgcgcgcgcagccggccgcgatccccgtcggccacgaggcgcgg
cccatcaccgagaccccgatcgagcgggtcacccaccgcccgaccggcatcggcgagctc
gaccgcgtgctcggcggcgggatcgtcccgggcgcggccatcctcttctcgggcgagccg
ggcgtcggcaagtcgacgctcctgctcgagacggcgtcccgcgtcgcctcgacgggcgcc
cgcgtgctctacgtctcggccgaggagtcggtgagccaggtgcggctgcgggccgagcgc
acgaacgcgctccacccgacgctcttcctcgcgtcggagaccgacctcgcgacgctgctc
gggcacgtcgagcaggtcgatccggcgctcctcatcgtcgactcgatccagacggtggcg
tcatcggaggtcgactcgctcgcggggcagccgagccaggtgcgcgaggtggcgtcggcg
ctcatccggctcgcgaagtcgcggaacctgccggtcatcatcgtcggccacgtgacgaag
gacggccaggtcgcgggcccgcgcctgctcgagcacctcgtcgacgtcgtcgcgcacgtc
gagggcgaccggcagacggccctgcgcttcgcgcgcaccctgaagaaccgcttcggcccg
accgacgaggtcggctgcttcgagatgaccggcgccgggatgcgcgaggtgcccgacccc
tcgggcctgttcctctccgagcgtgggacgcccgtgagcggcacctgcgtcaccgtcgcg
ctcgagggccggcgagcgctgccggtggagatccaggcgctcgtcgtgccgacccaggcg
ccgaacccgcgccgggtgacgaacggcgtcgacgcgagccgcgtcgcgatgctcctcgcc
gtgctcgagcggcgggtcgggatgaagctcgcccagtgcgacgtgtacgtgtcgaccgtc
gggggcgtgaagctcgcggagcccgccgccgacctcgccatcgcggcggcgatcgcctcg
gcggccgcgaaccggccgatccggcccgaggcggtcgtgttcggcgaggtctcgctcgcg
ggcgagatccggcgcgtggcgcaggcgaagctgcgggcgcaggaggcggcgcgcgtcgga
ttccggacggcgatcgacacctcggcgggcacggtgtcggatgccctccgcgaggcgctc
atgcccggcggcgcgagccgcgggccggcgtccgaggcgccgccggccgcgctcgccgag
tag
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