Pseudoclavibacter triregionum: USB125703_00524
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Entry
USB125703_00524 CDS
T07344
Symbol
clpC1
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpC1
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psev03110
]
USB125703_00524 (clpC1)
Chaperones and folding catalysts [BR:
psev03110
]
Heat shock proteins
HSP100
USB125703_00524 (clpC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
TniB
bpMoxR
AAA_14
ATPase_2
nSTAND3
Mg_chelatase
AAA_18
AAA_3
IstB_IS21
ResIII
DNA_pol3_delta2
RNA_helicase
TsaE
AAA_7
AAA_24
RuvB_N
NACHT
AAA_30
DUF815
VapE-like_dom
NBD_SMAX1
T2SSE
End3
Motif
Other DBs
NCBI-ProteinID:
CAG7844297
LinkDB
All DBs
Position
1:complement(586001..588517)
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AA seq
838 aa
AA seq
DB search
MFERFTDRARRVIVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAQALESLDISLDAVR
EQVQDIIGTGQQRPTAHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGAELNRVRQQVLQLLSGFQGKEPVAAGGEQPAPSSQQQGSAVLDQYGRNLTQA
ARDGKLDPVVGREKQIERVMQILSRRSKNNPVLVGEPGVGKTAVVEGLAQAIVNGDVPET
LKNKQVYSLDLGSLIAGSRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHALVGAGAAEGA
IDAASILKPLLARGELQTIGATTLDEYKKHFEKDAALERRFQPVTVDEPSIAHTINILKG
LKDRYEDFHKVTITEDAIVAAANLADRYVSDRFLPDKAIDLLDEAGARLRLSVLSSPPEL
RELDDKIASVRREKEQAAEAQDFEKAASLRDDEKQLLDERVRLEKKWKDGDVKASGTVDA
GLIAEVLAQATGIPVYKLTEEETARLVFMEDALHERVIGQDEAIKALSKTIRRTRAGLKD
PNRPSGSFIFAGPTGVGKTELAKALAEFLFDDESALISLDMSEFGEKHTVSRLFGAPPGF
VGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQVLEEGRLTDGQGRIVDFKNTV
IIMTTNLGTKDIAGGPVGFQADGDTQTSYDRMKAKVNEELKKHFKPEFLNRVDDTIVFPQ
LSSKELLQIVDLFVKRLSERMLDRDMTIEVSEEAKKQLIKIGFDPALGARPLRRAVQHEV
EDLLSEEILRGNLTAGDHVSVDYDGTEFTFTTRGRLEPVGAGAGVGSGPEAPAGDSAE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacgcttcaccgaccgcgcgcgtcgagtgatcgtcctcgcccaggaagaggcg
aagatgctcaaccacaactacatcggcaccgagcacatcctgctcgggctgatccacgag
ggcgagggcgtcgccgcccaggcgctcgagtcgctcgacatctccctcgacgcggtccgc
gagcaggtgcaggacatcatcggcaccggccagcagcgtccgaccgcccacatccccttc
acgccccgcgcgaagaaggtgctcgagctctcgctccgcgaggcgctccagctcggccac
aactacatcggcaccgagcacatcctcctcggcctcatccgcgagggcgagggcgtcgcc
gcccaggtgctcgtgaagctcggcgccgagctcaaccgcgtgcgccagcaggtgctccag
ctcctctccggcttccagggcaaggagcccgtcgccgccggcggcgagcagcccgcccct
tcgagccagcagcagggctcggccgtcctcgaccagtacggccgcaacctcacgcaggcc
gcgcgcgacggcaagctcgacccggtcgtcggccgcgagaagcagatcgagcgcgtcatg
cagatcctctcgcgccgctcgaagaacaaccccgtcctcgtgggcgagcccggcgtcggc
aagaccgccgtcgtcgagggcctcgcgcaggcgatcgtgaacggcgacgtgccggagacg
ctcaagaacaagcaggtctactccctcgacctcggctcgctcatcgcgggctcgcgctac
cgcggcgacttcgaggagcgcctcaagaaggtcacgaaggagatccgcacgcgcggcgac
atcatcgtcttcatcgacgagatccacgccctcgtgggcgcgggcgccgccgagggcgcg
atcgacgccgcctcgatcctcaagccgctcctcgcgcgcggcgagctccagacgatcggc
gccacgaccctcgacgagtacaagaagcacttcgagaaggacgccgcgctcgagcgccgc
ttccagccggtcaccgtcgacgagccctcgatcgcccacacgatcaacatcctcaagggc
ctcaaggaccgctacgaggacttccacaaggtgacgatcaccgaggacgccatcgtcgcg
gccgcgaacctcgccgaccgctacgtctcggaccgcttcctcccggacaaggccatcgac
ctcctcgacgaggcaggcgcccgcctgcgcctctcggtgctctcctcgccgcccgagctg
cgtgagctcgacgacaagatcgcgtccgtccgccgcgagaaggagcaggccgccgaggcc
caggacttcgagaaggccgcgagcctccgcgacgacgagaagcagctgctcgacgagcgc
gtacgcctcgagaagaagtggaaggacggcgacgtcaaggcgtccggcaccgtcgacgcc
gggctcatcgccgaggtgctcgcgcaagccacgggcatcccggtctacaagctcaccgag
gaggagaccgcccgcctcgtgttcatggaggacgccctccacgagcgcgtcatcggccag
gacgaggccatcaaggccctctccaagacgatccgccgcacccgcgccggcctcaaggac
ccgaaccgcccctcggggtcgttcatcttcgccggccccacgggcgtcggcaagaccgag
ctcgcgaaggcgctcgcggagttcctcttcgacgacgagtcggcgctcatctcgctcgac
atgtcggagttcggcgagaagcacacggtctcgcgcctcttcggcgctcctcccggattc
gtcggcttcgaggagggcggccagctcaccgagaaggtgcgtcgcaagccgttctccgtc
gtgctcttcgacgagatcgagaaggcgcacccggacatcttcaactcgctgctccaggtg
ctcgaggagggccgcctcaccgacggccagggccggatcgtcgacttcaagaacaccgtc
atcatcatgacgacgaacctcggcacgaaggacatcgcgggcggcccggtcggcttccag
gccgacggcgacacccagacgtcctacgaccgcatgaaggcgaaggtgaacgaggagctc
aagaagcacttcaagcccgagttcctcaaccgcgtcgacgacacgatcgtgttcccgcag
ctcagctcgaaggagctcctgcagatcgtggacctcttcgtgaagcgcctctcggagcgc
atgctcgaccgcgacatgaccatcgaggtgtcggaggaggcgaagaagcagctcatcaag
atcggcttcgacccggccctcggcgcccgaccgctgcgccgcgcggtgcagcacgaggtc
gaggatctgctctcggaggagatcctccgcggcaacctcaccgcgggcgaccacgtgtcg
gtcgactacgacggcacggagttcaccttcaccacgcgaggccgcctcgagccggtcggc
gcgggcgcgggcgtcggctccggccccgaggcccccgcgggcgactcggccgagtag
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