Pseudoclavibacter triregionum: USB125703_00661
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Entry
USB125703_00661 CDS
T07344
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_00661 (hup)
03036 Chromosome and associated proteins [BR:
psev03036
]
USB125703_00661 (hup)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00661 (hup)
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
USB125703_00661 (hup)
Chromosome and associated proteins [BR:
psev03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
USB125703_00661 (hup)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
USB125703_00661 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CPT
DUF7343
Motif
Other DBs
NCBI-ProteinID:
CAG7844428
LinkDB
All DBs
Position
1:complement(744070..744357)
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AA seq
95 aa
AA seq
DB search
MADKTVNKTELVAEIAGATDLSQAEVSRVIDAFFSSLAAHAAKGVKVSIPGWMAVEQTQR
AARTGRNPQTGEAIQIAASKGVKITAGSKLKAAVK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagaccgtgaacaagaccgagctcgtcgctgagatcgccggcgccaccgac
ctctcgcaggccgaggtctcgcgcgtcatcgacgcgttcttcagctcgctcgccgcgcac
gccgccaagggcgtcaaggtctcgatccccggctggatggccgtcgagcagacccagcgc
gccgcccgcacgggccgcaacccgcagacgggcgaggcgatccagatcgccgcgtcgaag
ggcgtgaagatcacggccggctcgaagctcaaggccgccgtcaagtag
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