Pseudoclavibacter triregionum: USB125703_00734
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Entry
USB125703_00734 CDS
T07344
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psev
Pseudoclavibacter triregionum
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_00734 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00734 (gyrB_1)
Enzymes [BR:
psev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
USB125703_00734 (gyrB_1)
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Topoisomerases
USB125703_00734 (gyrB_1)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
USB125703_00734 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
CAG7844501
LinkDB
All DBs
Position
1:816983..819163
Genome browser
AA seq
726 aa
AA seq
DB search
MADASIESAAQPEPGAEGGAQAPAGHADHQLAGTRKVEADYGASQIQVLEGLEAVRKRPG
MYIGSTGPEGLHHLVYEIVDNSVDEALAGYCDEIEVVLLADGRVRVTDNGRGIPVATHPV
EGISTLEVVLTKLHAGGKFGGGGYAVSGGLHGVGSSVVNALSFEFAARVQRDGSIWEMDF
ENGVPTGPIRQLGDTDETGTEITFLPNSDIFETVEFDYDVLRTRFQQMAFLNRGLSITLV
DERDPATLSTEDGIVSVTEIDEDAQPQDAAEEAEQTAEAIANPDEAEAKPAEPRRVTFKF
DRGIVDYVAHLVSRKKVTPVHEEIIEVLAEDEERRISLEIAMQWTEAYSESIHSFANTIN
TKEGGTHLEGFRAALTTVINRYAREKGLLKEKDENLSGEDVREGLGAVISIKLGEPQFEG
QTKMKLGNTEAKSFVQRELGQALQDWFDRNPSTAKDIVRKATQASAARLAARRAREQTRR
KGLLESSGMPGKLKDCSSKNPAESEIFMVEGDSAGGSAVQGRNPATQAILPLRGKILNVE
KARIDRALQNAEIQAMITAFGAGLGDDFDPEKVRYHKIILMADADVDGQHITTLLLTLLF
RYMNPLIQLGYVYLAQPPLYRIKWSNAEHEYAYSDRERDGLLEAGRAAGKRIPKDNAIQR
YKGLGEMNYQELWETTMNPDTRQLLQVTVADAEAADEVFSTLMGEDVDSRRTFIQQNAHD
VRFLDI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcatcgatcgaatccgcagcgcagcccgagccgggcgcggagggcggcgcg
caggcgcccgccggccacgccgaccaccagctcgcgggcacgcggaaggtcgaggccgac
tacggcgcgagccagatccaggtgctcgagggcctcgaggccgtccgcaagcgcccgggc
atgtacatcggctcgaccggccccgagggcctccaccacctcgtgtacgagatcgtcgac
aactccgtcgacgaggcgctcgccggctactgcgacgagatcgaggtcgtcctcctcgcc
gacggccgcgtccgcgtcaccgacaacggccgcggcatccccgtcgcgacccaccccgtc
gagggcatctccaccctggaggtcgtgctcacgaagctccacgccggcggcaagttcggc
ggcggcggctacgcggtctccggcggcctccacggcgtcggctcctccgtcgtgaacgcg
ctctccttcgagttcgcggcccgcgtgcagcgcgacggcagcatctgggagatggacttc
gagaacggggtcccgaccggcccgatccgccagctcggcgacaccgacgagaccggcacc
gagatcacgttcctcccgaactccgacatcttcgagaccgtcgagttcgactacgacgtg
ctccgcacgcgcttccagcagatggccttcctcaaccgcggcctcagcatcaccctcgtc
gacgagcgcgaccccgcgacgctctcgacggaggacggcatcgtctccgtcaccgagatc
gacgaggacgcccagccgcaggacgccgccgaggaggccgagcagaccgccgaggcgatc
gcgaacccggacgaggccgaggcgaagcccgccgagccccgccgcgtcaccttcaagttc
gaccgcggcatcgtcgactacgtcgcccacctcgtctcgcgcaagaaggtcacgcccgtc
cacgaggagatcatcgaggtcctcgccgaggacgaggagcgccgcatctccctcgagatc
gccatgcagtggacggaggcctactccgagtcgatccactccttcgcgaacacgatcaac
acgaaggagggcggcacccacctcgagggcttccgcgccgcgctcacgacggtcatcaac
cgctacgcgcgcgagaagggcctcctcaaggagaaggacgagaacctctccggcgaggac
gtccgcgagggcctcggcgccgtcatctcgatcaagctcggcgagccccagttcgagggc
cagacgaagatgaagctcggcaacaccgaggcgaagtccttcgtgcagcgcgagctcggc
caggccctccaggactggttcgaccgcaacccgtcgacggcgaaggacatcgtccgcaag
gcgacccaggcctcggccgcgcgcctcgcggcccgccgcgcccgcgagcagacccgccgc
aagggcctcctcgagtcgagcggcatgcccggcaagctcaaggactgctcctcgaagaac
ccggccgagtccgagatcttcatggtcgagggcgactccgccggcggctcggcagtccag
ggccggaaccccgcgacgcaggcgatcctcccgctgcgcggcaagatcctcaacgtcgag
aaggcgcgcatcgaccgcgccctccagaacgccgagatccaggcgatgatcaccgccttc
ggcgccggcctcggggacgacttcgaccccgagaaggtccggtaccacaagatcatcctc
atggccgacgccgatgtcgacgggcagcacatcacgacgctcctgctcacgctgctcttc
cgctacatgaacccgctcatccagctcgggtacgtgtacctcgcgcagccgccgctctac
cgcatcaagtggtcgaacgccgagcacgagtacgcctactcggatcgcgagcgcgacggc
ctcctcgaggccggccgcgccgccggcaagcgcatccccaaggacaacgcgatccagcgc
tacaagggcctcggcgagatgaactaccaggagctctgggagacgacgatgaacccggac
acgcgccagctgctccaggtcaccgtcgccgacgcagaggccgccgacgaggtgttctcg
accctcatgggcgaggacgtcgactcccgccgcacgttcatccagcagaacgcccacgac
gtccgcttcctcgacatctag
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