Pseudoclavibacter triregionum: USB125703_00909
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Entry
USB125703_00909 CDS
T07344
Symbol
aplIM
Name
(GenBank) Modification methylase AplI
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev00270
Cysteine and methionine metabolism
psev01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
USB125703_00909 (aplIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psev03000
]
USB125703_00909 (aplIM)
03032 DNA replication proteins [BR:
psev03032
]
USB125703_00909 (aplIM)
03036 Chromosome and associated proteins [BR:
psev03036
]
USB125703_00909 (aplIM)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
psev02048
]
USB125703_00909 (aplIM)
Enzymes [BR:
psev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
USB125703_00909 (aplIM)
Transcription factors [BR:
psev03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
USB125703_00909 (aplIM)
DNA replication proteins [BR:
psev03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
USB125703_00909 (aplIM)
Chromosome and associated proteins [BR:
psev03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
USB125703_00909 (aplIM)
Prokaryotic defense system [BR:
psev02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
USB125703_00909 (aplIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CAG7844667
LinkDB
All DBs
Position
1:complement(1006707..1007762)
Genome browser
AA seq
351 aa
AA seq
DB search
MTIFRLGEFFAGPGGIAQGARDARIDTPGWSIEHAWATDYDADTVATYAHNQSPHRPESV
ICEDVRQLDYARLDRFGPIDGFAFGFPCNDFSVVGERKSFDGTFGPLYTYGVKALDRWQP
RWFLAENVGGITADGALNRVMADLAAQGYRLNAHLYNFADYGVPQARRRVIIIGIHESEE
VRFRVPSPSAWSDVDVSARTALEGIPADAPHQEPTRQSARVIERLSYIGPGENAWSANVP
EDLRLNVPNTRLSHIYKRLHPDKPSYTITGSGGGGTHVYHWSENRALTNRERARLQTFPD
DYWFAGSKESIRKQIGMAVPPKGAQVIFEALLRSFADEDYESVPASIREDD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcttccgacttggtgagttcttcgccggccctggaggcatagcccagggagct
cgcgacgcgcggatcgatactcccggctggtcgatcgagcacgcttgggccaccgactac
gacgcggacaccgttgcgacgtacgcgcacaatcagtcgccgcatcgccccgaatcggtc
atctgcgaagacgtccgacagctcgactacgcgcgtctcgaccgcttcggaccaatcgac
gggttcgcgttcggcttcccctgcaatgacttcagcgtcgtcggggagcgcaagtcattt
gacggcaccttcggaccgctctacacctacggtgtcaaggcgctggaccgctggcagcct
aggtggttccttgccgagaacgttggtggaatcaccgcggacggtgcgctgaatcgcgta
atggctgacctcgccgcgcagggataccggctcaacgcccacctgtacaacttcgccgac
tatggagttccccaggcgcgccggcgagtcatcatcatcgggatccacgagtcggaagag
gtgcgcttccgcgttccgtcaccgtccgcctggagtgatgtcgacgtgtccgcacggact
gccctcgaggggatcccggccgatgctcctcaccaagagcccacgcgccaatctgctcga
gtgattgagcgcttgagctacatcgggcccggcgagaacgcgtggagcgcgaacgttccg
gaagacctccggctcaatgtgcccaatacgcgactgagccacatctacaagcggctccac
ccggacaagccgtcctacacgatcactgggtccggaggcggaggcacgcacgtctaccac
tggtcagagaaccgcgcgctcacgaaccgtgagcgggctcgtctgcagaccttccccgac
gactactggtttgcggggagcaaggagtccatccgcaagcagatcgggatggcggtgcct
cccaagggggcgcaagtcatcttcgaggcgcttctgcgcagcttcgcggacgaggactac
gagtccgtgccggcgtcgattcgagaagacgactag
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