Pseudoclavibacter triregionum: USB125703_00931
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Entry
USB125703_00931 CDS
T07344
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev03030
DNA replication
psev03430
Mismatch repair
psev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
USB125703_00931 (dnaX_1)
03430 Mismatch repair
USB125703_00931 (dnaX_1)
03440 Homologous recombination
USB125703_00931 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psev03032
]
USB125703_00931 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
psev03400
]
USB125703_00931 (dnaX_1)
Enzymes [BR:
psev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
USB125703_00931 (dnaX_1)
DNA replication proteins [BR:
psev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
USB125703_00931 (dnaX_1)
DNA repair and recombination proteins [BR:
psev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
USB125703_00931 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
DnaX_C
AAA_18
AAA_14
zf-CXXC
DEAD
AAA_16
Rad17
Motif
Other DBs
NCBI-ProteinID:
CAG7844686
LinkDB
All DBs
Position
1:1026631..1029393
Genome browser
AA seq
920 aa
AA seq
DB search
MVGMATALYRRYRPDTFAGMIGQQQVTGPLMTALRTGRVNHAYLFSGPRGCGKTSSARIL
ARCLNCEQGPTDTPCGECDSCRELARDGGGSLDVIEIDAASHGGVDDARDLRDRAVLAPS
RDRYKIFIIDEAHMVSSAGFNALLKVVEEPPEHVRFVFATTEPEKVIGTIRSRTHHFPFR
LIPPALMLEYVEKLCGEEGVTADPGVLPLVVRAGGGSARDTLSLLDQIIGGSEGDRIDYE
RAAALLGFTSTELLDATIAAFAAQDAAQAYLAIDRVIQSGQDPRRFVEDLLERVRDLIVV
AATGEGAGAVLRGTSADEVERLRGEASGFSPAGLAGMADLIDATLTEMSGVTSPRLHLEL
MVARILVAMRARFAGAGTASSSALASAPAQAAAPAQATAPAPSAAPMPTPSHADEPSAAA
GERELAAASEPRPASLREALGADGRGATPAAESKPADPKPAAELKPVAAPTEPAAEQVPP
APQPKPADESAKPAAPSTSEAAAGTASAPAAERDPASVSPDQFRHAWPSILEHVKQHGRL
QAWTIVSNIRPRAYQDGILDFEAPNAAVLAEFKERGAEHVRAAVRELLGIQVKFRPVVVD
RRGPSDGRRARPAPAADEDPSRGGSAAGRAPAQAPAPSRPAPSGAAPSRTTPSRPGQPAA
DLPSGPFPSWNVVPIPGSEPKAEEAPGSAWDEVATGPKTPPEPEASAAPVAVRPGEVSAA
VEAEQERPQESPAPDDEQPASALAGMPSDDEAPEIIAAREIEAREAENAPQPFDPSKPAP
ADARIAAATGAAPFAADAVPPAETGIEAPEEDEPPFDDESPFDDEPPFDPDYDAPGASPA
GPSIPAAPAAASATAPASAPSTPAPSTAAATPADAPGTGPSFERYGEAVIREQLGARFVG
EDPILPPAPVEELEPEGEEA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcatggccaccgccctgtaccgccgctatcggcccgacaccttcgccggcatg
atcggccagcagcaagtgaccggtcccctcatgacggcgctgcgcacggggcgcgtgaac
cacgcctacctgttctccggcccccgtggctgcggcaagacgagctcggcgcgcatcctc
gcccgctgcctcaactgcgagcagggcccgaccgacaccccctgcggcgagtgcgactcg
tgccgcgagctcgcgcgcgacggcggcggctcgctcgacgtcatcgagatcgacgccgcg
agccacggcggcgtcgacgacgcccgcgacctccgcgaccgggccgtgctcgccccgagc
cgcgaccgctacaagatcttcatcatcgacgaggcccacatggtctcctcggccggcttc
aacgccctcctcaaggtcgtcgaggagccgccggagcacgtgcgcttcgtcttcgcgacg
accgagcccgagaaggtcatcggcacgatccgctcgcgcacgcaccacttcccgttccgg
ctcatcccgcccgcgctcatgctcgagtacgtcgagaagctctgcggcgaggagggcgtg
acggccgatccgggcgtgctgcccctcgtcgtccgcgcgggcggcggctcggcgcgcgac
accctctcgctgctcgaccagatcatcggcggctccgagggcgaccgcatcgactacgag
cgcgccgcggcgctgctcggcttcacgagcacggagctgctcgacgcgacgatcgcggcc
ttcgccgcgcaggacgccgcgcaggcctacctcgccatcgaccgcgtcatccagtcgggg
caggaccctcgccgcttcgtcgaggacctcctcgagcgcgtgcgcgacctcatcgtcgtc
gccgcgacgggagagggcgcgggcgcggtgctgcgcggcacctcggccgacgaggtcgag
cggctgcgcggggaggcctcgggattctcgcccgcgggcctcgccggcatggcggatctc
atcgacgccaccctcacggagatgtcgggcgtcacctcgccgcgcctccacctcgagctc
atggtcgcgcgcatcctcgtcgcgatgcgggcgcgcttcgcgggggccgggacggcttcg
tcttcggccctcgcctcggcgccggcgcaggccgccgcccccgcgcaggcgaccgctccc
gccccgtcggccgctccgatgcccaccccttcccacgcggatgagccgagcgccgccgcg
ggggagcgggagctcgccgccgcctccgagccgcgccccgcgagcctccgcgaggcgctc
ggagcggatggtcggggcgcgacgcccgccgcggagtcgaagcccgcggacccgaagccc
gccgccgagttgaagccggtcgccgctccgaccgagcctgccgccgagcaggtcccgccc
gcaccgcagcccaagcccgcggacgaatcggcgaagcccgccgcgccctcgacgtccgag
gccgccgccggcacggcatccgcccccgccgccgagcgcgaccccgcgagcgtctcgccc
gaccagttccgccacgcgtggccgagcatcctcgagcacgtgaagcagcacggccgcctc
caggcgtggacgatcgtgagcaacatccgcccccgcgcctaccaggacggcatcctcgac
ttcgaggcgccgaacgccgccgtgctcgccgagttcaaggagcgcggggccgagcacgtc
cgcgcggccgtgcgcgagctcctcggcatccaggtgaagttccgccccgtcgtcgtcgac
cgccgcgggccgagcgacggccgccgggcccggcccgcgcccgccgcggacgaggacccc
agccgaggcggatccgcagccggccgggcgcccgcgcaggccccggcgccgagccgtcct
gccccgtctggcgcggccccctcgcgcacgaccccgtcgcgcccgggccagcccgccgcc
gacctcccctccggccccttcccgagctggaacgtcgtgccgatccccggctccgagccg
aaggccgaggaggcccccggatcggcgtgggacgaggtcgccaccggcccgaagacgccg
cccgagcccgaggcgtccgccgcgcccgtcgccgtgcgtcccggcgaggtctcggccgcc
gtcgaggccgagcaggagcgcccgcaggagtcgcccgcccccgacgatgagcagccggcg
agcgcgctcgcgggcatgccgtccgacgacgaggcccccgagatcatcgccgcgcgcgag
atcgaggcgcgcgaggccgagaacgctccgcagcccttcgacccctcgaagcccgcgccc
gccgacgcccgcatcgccgccgcgaccggcgccgcgcccttcgcggccgacgccgtgccc
ccggccgagacgggcatcgaggcgcccgaggaggacgagccgcccttcgacgacgagtcg
cccttcgacgacgagccgccgttcgatcccgactacgacgccccgggcgcgagccccgcg
ggtccgtcgatccccgcggcccctgcggcggcctccgcgacggcgcctgcctccgcaccc
tcgacacccgcgccgtcgaccgccgcggccacccccgccgacgcccccggcaccggcccg
tccttcgagcgctacggcgaggccgtcatccgcgagcagctcggcgcgcgcttcgtcggc
gaggacccgatcctcccgccggcccccgtcgaggagctcgagcccgagggcgaggaggcc
tga
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